CXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTTGCAAGGAA
ACCATTTTCAAAAGCTTTTTCTTGATCGCCAATTTATTTATTAAATGTTT
TTGACTGCTATAAAAGCTACTGCATCATCGCTTTAAGATAATTTGTATTG
CCCTAAGATTACAGATTCTTATATGCTTTGAAATACAGAATGGCTCACTA
GAGAACTGCCCCATTATGATACTTTCTGCTAAATAATGTGATTTTTTAAT
TTTTATTTATGAAACACACAATTATCAATCTTCATGATGTTCATGACATG
ATAACTCCAATAGGTTTTTTTTTACATTAAATGATCTGTATCACCCTAAT
ATTATTAAAATGGTATAAAGTTATAAAAATGTTGAGGTATAACAGCCATT
TTATTTAAAGTTTAGATTTTACACTCTGGTATGGCCACTTTATCTGTTGC
ACCCTAGACCATTTGGCTGATCTTCCAGAATTCAACTACTTCTAACTTAA
TGAAAGCAACCACATTTCAAAGAATTATCTTTTGAGTAATGTAGGAAAAA
TAACAACATATCTTTACCCCATATCTCAATACTATATATGAATCGCCTTT
CTCCCCTTCAGATATAAACACTTGATACTCTCCAAGTATATTTATGTAGC
TCATTCATATTGACTGCTGAACATGGCTTAAGACAGTTTCCATTTTAAAT
GATTAGAAGGGCGACTTCCCTCTATT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXAGTCCTCCCTGGGCCATAGGACTTAACATAGATTTCTGTTTA
AAATATCGTTTATTCTCCTGATGTAAGTGGTTTGGAGGTTTGCTGCTGAA
GAAGCTTATCGTTTGTAGTTCGTTCTGAACTCTGGCTGGCTGGTTCATCT
CAGTTGTTCTGGTCCAAACTCTTCTCCAAGCTGACTGATTCAATCTGACT
TCTCTCAGATTCTCACTAAATTTGTTCTGATGGCCTCAAACAAATTCTGG
CAATATGTTCTAATCTTCCGGCTCCTTCTCATTCTCTGGCTGATCGTCTT
CATCTGTGTCTAACTTGTTCTCTCTGCAATTTGTCTCTGTAAAAACTGCC
TCTGAACTCCATGAACTTATCTACCACATACTCCACTCTCCTGTACTGGC
TTCTCACTCCCTGACTCTGCCCATTTGACTGATATTCCATCTTCCTTGCA
CTGAACTCAACTGACTTCTGAGTAACGCGATTAATTGCTTCCATCACCTC
CCTTGTATTTTACCCCTTTCCTGTACCTGACCCTTATTCCTTCCCATTTT
CTTCTTTTTTACTCGCCTGCTCCTCATTCTCTCTTCTGCGTTCTTGGCTT
TACTACCCTTTTTCCCTTCTTATATCTCTCATCATTCCCTCTTGTTTTCC
CTTCTTATTTTTCCCCTCCCCCTTTTTTCTTCCCCCTCTTTTCTTN

Query= MSMg01no359_c12.b1 MSMg01no359_c12.b1 CHROMAT_FILE:
MSMg01no359_c12.b1 PHD_FILE: MSMg01no359_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:36 2005
         (582 letters)



>mm_chr16_40683980_40684960
          Length = 981

 Score = 1052 bits (544), Expect = 0.0
 Identities = 565/572 (98%), Gaps = 1/572 (0%)
 Strand = Plus / Minus

                                                                       
Query: 11  tcttgcaaggaaaccattttcaaaagctttttcttgatcgccaatttatttattaaatgt 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 781 tcttgcaaggaaaccattttcaaaagctttttcttgatcgccaatttatttattaaatgg 722

                                                                       
Query: 71  ttttgactgctataaaagctactgcatcatcgctttaagataatttgtattgccctaaga 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttttgactgctataaaagctactgcatcatcgctttaagataatttgtattgccctaaga 662

                                                                       
Query: 131 ttacagattcttatatgctttgaaatacagaatggctcactagagaactgccccattatg 190
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttacagattcttatatgctttgaaatacagaatggctcactagagaactgccccattatg 602

                                                                       
Query: 191 atactttctgctaaataatgtgattttttaatttttatttatgaaacacacaattatcaa 250
           |||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||
Sbjct: 601 atactttctgctaaataatgtgattttaaaatttttatttatgcaacacacaattatcaa 542

                                                                       
Query: 251 tcttcatgatgttcatgacatgataactccaataggtttttttttacattaaatgatctg 310
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 541 tcttcatgatgttcatgacatgataactccaatagg-ttttttttacattaaatgatctg 483

                                                                       
Query: 311 tatcaccctaatattattaaaatggtataaagttataaaaatgttgaggtataacagcca 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tatcaccctaatattattaaaatggtataaagttataaaaatgttgaggtataacagcca 423

                                                                       
Query: 371 ttttatttaaagtttagattttacactctggtatggccactttatctgttgcaccctaga 430
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttttatttaaagtttatattttacactctggtatggccactttatctgttgcaccctaga 363

                                                                       
Query: 431 ccatttggctgatcttccagaattcaactacttctaacttaatgaaagcaaccacatttc 490
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 362 ccatttggctgatcttccagaattcaactacttctaatttaatgaaagcaaccacatttc 303

                                                                       
Query: 491 aaagaattatcttttgagtaatgtaggaaaaataacaacatatctttaccccatatctca 550
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaagaattatcttttgagtaatgtaggaaaaataacaacatatctttaccccatatctca 243

                                           
Query: 551 atactatatatgaatcgcctttctccccttca 582
           ||||||||||||||||||||||||||||||||
Sbjct: 242 atactatatatgaatcgcctttctccccttca 211


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 981
Length adjustment: 10
Effective length of query: 572
Effective length of database: 971
Effective search space:   555412
Effective search space used:   555412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)