Query= MSMg01no360_e05.b1 MSMg01no360_e05.b1 CHROMAT_FILE:
MSMg01no360_e05.b1 PHD_FILE: MSMg01no360_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:58 2005
(362 letters)
>mm_chr16_80127379_80128135
Length = 757
Score = 603 bits (312), Expect = e-177
Identities = 348/362 (96%), Gaps = 5/362 (1%)
Strand = Plus / Plus
Query: 1 caaaggctgagaaatataatgttaaatggatgtggactctatttataaaatataaatcag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 caaaggctgagaaatataatgttaaatggatgtggactctatttataaaataaaaatcag 260
Query: 61 tcaaagggaaaggttagaaaccttattcaaatgaaaaatttttacctaataagcaccatt 120
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 261 tcaaagggaaaggttagaaaccttattcaaaggaaaaatttttacttaataagcaccatt 320
Query: 121 attaaaacagttgtagtctaatgtgattatcctgcactaaattcacttaaataaattatg 180
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 attaaaacagt---agtctaatgtgattatcgtgcactaaattcacttaaataaattatg 377
Query: 181 ctacttcatgtctcagtaataggattaatttgtagcttcaatttattcaatctcccagat 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctacttcatgtctcagtaagaggattaatttgtagcttcaatttattcaatctcccagat 437
Query: 241 gcttctcatatttattccctgtatcttgtatcttctatgacatgctaaggtgtgagtact 300
|||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 438 gcttctcaaagaaattccctgtatcttgtatcttctatgacatgctaaggtg--agtact 495
Query: 301 tatccttcttcccaaattcacatgttgaactcttcacattcagagtgatgtcatcatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tatccttcttcccaaattcacatgttgaactcttcacattcagagtgatgtcatcatgga 555
Query: 361 ct 362
||
Sbjct: 556 ct 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 757
Length adjustment: 9
Effective length of query: 353
Effective length of database: 748
Effective search space: 264044
Effective search space used: 264044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_e05.g1 MSMg01no360_e05.g1 CHROMAT_FILE:
MSMg01no360_e05.g1 PHD_FILE: MSMg01no360_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:58 2005
(423 letters)
>mm_chr16_80267243_80268065
Length = 823
Score = 810 bits (419), Expect = 0.0
Identities = 422/423 (99%)
Strand = Plus / Minus
Query: 1 tgttgatatgggtatgcttgttggctgtatgcaatagagtgagcaagtccataaccctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgttgatatgggtatgcttgttggctgtatgcaatagagtgagcaagtccataaccctag 564
Query: 61 ggtatgtagaggtcagagtggaatctcccttgttggtccttgcctattgaattgtttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggtatgtagaggtcagagtggaatctcccttgttggtccttgcctattgaattgtttgag 504
Query: 121 agtgtctatcattgttgctaaatgtgtcatcctagctaaggagcccgagagcttctagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agtgtctatcattgttgctaaatgtgtcatcctagctaaggagcccgagagcttctagaa 444
Query: 181 attctcctgtcttgatcacctatttcttgtcatcatgtaccaagatccacctcacctacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attctcctgtcttgatcacctatttcttgtcatcatgtaccaagatccacctcacctacc 384
Query: 241 tttcatatatgccctgaggattcgaatatggctcctaatccttgtgcagcaatagacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttcatatatgccctgaggattcgaatatggctcctaatccttgtgcagcaatagacttt 324
Query: 301 ccaactaaaccaccttttcaagcctgtcattattatcttaaaggaatatcaaataaatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccaactaaaccaccttttcaagcctgtcattattatcttaaaggaatatcaaataaatct 264
Query: 361 catggaaatgaagccattcacccagacttccagtgcaccaaggaagcaagatttatacgt 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 263 catggaaatgaagccattcacccagacttccagtgcaccaaggaagcaggatttatacgt 204
Query: 421 caa 423
|||
Sbjct: 203 caa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
