ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTGATCTTTCCCGACTTTTATCATGAATGGGTTTTGGATCTTGTCAA
ATGCTTTTTCTGCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGAGT
TTGTTTATATAATGGATTACATTCATGGATTTTCATATATTAAACCATCC
CTGCGTCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTTAA
TGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTGCATCG
ATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGGTCTTT
CTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTGGGTA
GAGTACCTTCTACTTCTATTTTTTTTTTTTTTTTATTGTTGATATATAGA
GACAAAACTAGCCCTATGTGTTTTGTGTGTGTGTGTGTGTGTGTGTATGT
GTGTGTGTGTNNNNTATATNNNTTTTTTTTTTNNTTTTTTTTTTTTTTTT
GTTNGTTTTTTTTTGTTTTTTGTTTTTTTTTTTGTGGTGGTTTGTTTTTT
TTGTGTTTTTTGTTGGGTTATTTTGGGTGGTTTTTTTTTTTTGTTTTATT
TTATTGTTTTTTTTTTAGTTTATTTTTTATTTTATTTTTTTTGTGTGNAG
TGTGTGTTTAAGTTTTTTTTTT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGCCAGAATGGAACATGAGAGAACATT
ATGTAAAAATCACTTCTTGTTTCAAATCTCTCAAAATCCCTGAGCCCTGT
ATCAGTACAGGCTCCTTACGAGGATGGAGTTCGGAACAATGTATAAAGCA
CAAGCGTTTGCTGTAACGATAGTCATTCTTGATTCACATTTTCATAACAT
CCTATTGTAATGTCCCTACCATGTTTATGCTGAAACACAACAAGGCTCTG
TCAGGGATCCAACAAATGTGAAGGAGTTGGAGTCAATGTGGAATTCTCGA
TGTTAATATTTCCTTTCTGACCAAATGAGCTCCACATGTTTTCTGCTGCG
ACGAATCTCCTTCCTGTGGAATTAGGCATGCTCTGACTCATTCTTTATTT
TTTGAGCACAACAATTTAATCCAGAGTAGTCCTCATTTCACATAGCCTGG
GGCTCTTGGTTCATCGCTGTCTGCTGGCATTAGTGCTAAACTACAGGGCA
AAGGTGTGGAATTATAAGAGAAAGGTTCTCAGTACCCAGGTGCAGGCAAA
AAAGCCTTGGCCAGTGACCTGCTAGAGAAAGGCTGTAGGTAGCCTGAGTC
TGAAGAGAAAACACTGCTCAGATATCTGTTGATCTGTANGTGTGATGAAA
TGCTCCAGAACAAATTTATGACTTTTACATTAGACCTTT

Query= MSMg01no360_i02.g1 MSMg01no360_i02.g1 CHROMAT_FILE:
MSMg01no360_i02.g1 PHD_FILE: MSMg01no360_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:16 2005
         (571 letters)



>mm_chr16_86765953_86766923
          Length = 971

 Score = 1096 bits (567), Expect = 0.0
 Identities = 570/571 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agccagaatggaacatgagagaacattatgtaaaaatcacttcttgtttcaaatctctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccagaatggaacatgagagaacattatgtaaaaatcacttcttgtttcaaatctctca 260

                                                                       
Query: 61  aaatccctgagccctgtatcagtacaggctccttacgaggatggagttcggaacaatgta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatccctgagccctgtatcagtacaggctccttacgaggatggagttcggaacaatgta 320

                                                                       
Query: 121 taaagcacaagcgtttgctgtaacgatagtcattcttgattcacattttcataacatcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagcacaagcgtttgctgtaacgatagtcattcttgattcacattttcataacatcct 380

                                                                       
Query: 181 attgtaatgtccctaccatgtttatgctgaaacacaacaaggctctgtcagggatccaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgtaatgtccctaccatgtttatgctgaaacacaacaaggctctgtcagggatccaac 440

                                                                       
Query: 241 aaatgtgaaggagttggagtcaatgtggaattctcgatgttaatatttcctttctgacca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatgtgaaggagttggagtcaatgtggaattctcgatgttaatatttcctttctgacca 500

                                                                       
Query: 301 aatgagctccacatgttttctgctgcgacgaatctccttcctgtggaattaggcatgctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgagctccacatgttttctgctgcgacgaatctccttcctgtggaattaggcatgctc 560

                                                                       
Query: 361 tgactcattctttattttttgagcacaacaatttaatccagagtagtcctcatttcacat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgactcattctttattttttgagcacaacaatttaatccagagtagtcctcatttcacat 620

                                                                       
Query: 421 agcctggggctcttggttcatcgctgtctgctggcattagtgctaaactacagggcaaag 480
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 agcctggggctcttggttcatcgctgtctgctggcattagtgctaagctacagggcaaag 680

                                                                       
Query: 481 gtgtggaattataagagaaaggttctcagtacccaggtgcaggcaaaaaagccttggcca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtgtggaattataagagaaaggttctcagtacccaggtgcaggcaaaaaagccttggcca 740

                                          
Query: 541 gtgacctgctagagaaaggctgtaggtagcc 571
           |||||||||||||||||||||||||||||||
Sbjct: 741 gtgacctgctagagaaaggctgtaggtagcc 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space:   539121
Effective search space used:   539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)