CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTAAGCCCATGGCCTGCTCAAGGACTTTCTAGGACTGTTGGAACAC
TGGTGAAGGCTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTTATAAT
AGGATAATACTAAAAGAGAGCACGTGGATCCATACACCAGACTAACGCGG
GAATGGAATATGGAATATTAATGTATGGGTTAGAGAGAACGCCAGACTCC
AGGAGGTGAATTTCCGTGAAACTCTCTGCCTCGTGAGTGGCTTCTAGGCC
TCCCGGCCTGTCAAGCTGACTCGACCAGAGTGCGTGGCAATACTACTACT
ACTACTACTACTACTACTACTACTACTACTACTACTACTAAATAAATAAA
ACTCTTTCACCCAAATCTTGCTCTATCAAAAAAGTTGCTGTAGACTGAAT
GTTCATGTCTCTGTAACATATAATCCCCAGGGGTGGCTGTATTTGAAGAG
GGGATTTCTTAGCAAGTAATTAAGTGACTCATAAGGGTAAAGCCCTGATT
GATTAGTGTTCTTATCAGAAGGGATATCAAAGAGCTTTGTTCTTCCCTGT
TTTCCTTTCTTCTTCCTTCCCTGCCCATCCTTCCCCATCTGTCTTCCTGT
GCGTGAGCCTGCTTACGCTCCCAGNAAGAAAGCTATCGTGTTGGAGGATA
CAGCAAGAAACCTTCTGGAAGGCACGAAGAGCCCTCCCCA

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAAAAAGACCCTCCATGAAATGCTTA
GGAGCAAGATCAAGTAGCTGTCATACCAAGGATGGCATCGAGGGAAACGG
ACTCTTCCCTACGGGATATAGGGTGAAAGCAAAACAAACAAACAAACAAA
CAAAAAAACAGTAAACAAATTAATAATTCAATCTAGCAAGACGTGGTTCA
ATCCGTCCAAATCACAGATCCCTCTACACAGTCATAAAGGGCAATCTAAA
AAGAAAACGACACTCTTTTTTTTTTTTTTAAATACGGAGCATTAAAAAGA
ACAAAATACTTAGGAATACATTTAAGCAAAGAGACAACAAACATTGCATT
ACAAAAATGCCAATATAAAACCTAAACCCTCAGAGAAACCTACTTTGTTC
CTGAATGAGAAGACACTGTTGGGAAGATGACATTGATACCCGAAGCCATC
TATGGGTTCTATCAAATACTTGTGCTGGAATGTTTAAGGCAGCCTTCTTC
CCAGTAGTTACAAAGGTGACAATCTAGCTCAGTGTCTATCACTTGCCTCA
CATGAATAAGGGTTTGACCTCTACTACCCCACCTGGAAGCAGAAATTAGA
TTGTAACAGCAAATGCTGGATGATTCCATTTATACGCCACACCCAGAACA
GGGCACTCTATAAGTGTAAGAAGAGCTTTAATCGTTGACTGGGA

Query= MSMg01no360_j02.g1 MSMg01no360_j02.g1 CHROMAT_FILE:
MSMg01no360_j02.g1 PHD_FILE: MSMg01no360_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:21 2005
         (572 letters)



>mm_chr16_76771402_76772372
          Length = 971

 Score = 1071 bits (554), Expect = 0.0
 Identities = 566/572 (98%), Gaps = 5/572 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaaagaccctccatgaaatgcttaggagcaagatcaagtagctgtcataccaaggatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 caaaaagaccctccatgaaatgcttaggagcaagatcaagtagctgtcataccaaggatg 536

                                                                       
Query: 61  gcatcgagggaaacggactcttccctacgggatatagggtgaaagcaaaacaaacaaaca 120
           |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||
Sbjct: 535 gcatcgagggaaacggactcttccctacgggatatagggtgaaagca----aaacaaaca 480

                                                                       
Query: 121 aacaaacaaaaaaacagtaaacaaattaataattcaatctagcaagacgtggttcaatcc 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 aacaaacaaaaaaacaataaacaaattaataattcaatctagcaagacgtggttcaatcc 420

                                                                       
Query: 181 gtccaaatcacagatccctctacacagtcataaagggcaatctaaaaagaaaacgacact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtccaaatcacagatccctctacacagtcataaagggcaatctaaaaagaaaacgacact 360

                                                                       
Query: 241 cttttttttttttttaaatacggagcattaaaaagaacaaaatacttaggaatacattta 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctttttttttttttt-aatacggagcattaaaaagaacaaaatacttaggaatacattta 301

                                                                       
Query: 301 agcaaagagacaacaaacattgcattacaaaaatgccaatataaaacctaaaccctcaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agcaaagagacaacaaacattgcattacaaaaatgccaatataaaacctaaaccctcaga 241

                                                                       
Query: 361 gaaacctactttgttcctgaatgagaagacactgttgggaagatgacattgatacccgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaaacctactttgttcctgaatgagaagacactgttgggaagatgacattgatacccgaa 181

                                                                       
Query: 421 gccatctatgggttctatcaaatacttgtgctggaatgtttaaggcagccttcttcccag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gccatctatgggttctatcaaatacttgtgctggaatgtttaaggcagccttcttcccag 121

                                                                       
Query: 481 tagttacaaaggtgacaatctagctcagtgtctatcacttgcctcacatgaataagggtt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tagttacaaaggtgacaatctagctcagtgtctatcacttgcctcacatgaataagggtt 61

                                           
Query: 541 tgacctctactaccccacctggaagcagaaat 572
           ||||||||||||||||||||||||||||||||
Sbjct: 60  tgacctctactaccccacctggaagcagaaat 29


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 971
Length adjustment: 10
Effective length of query: 562
Effective length of database: 961
Effective search space:   540082
Effective search space used:   540082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)