Query= MSMg01no362_f16.b1 MSMg01no362_f16.b1 CHROMAT_FILE:
MSMg01no362_f16.b1 PHD_FILE: MSMg01no362_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:41 2005
(520 letters)
>mm_chr16_29477065_29477987
Length = 923
Score = 930 bits (481), Expect = 0.0
Identities = 508/519 (97%), Gaps = 5/519 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaagcataagtgctatatgttgtaatttgtaaaaattccaatgaggtttgttac 63
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaagcaaaagtgctatatgttgtaatttgtaaaaattccaatgaggtttgttac 263
Query: 64 aaaagaaattatttgaaagcctgtctatttccaattgattttgagtatgaaatggtgcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaaagaaattatttgaaagcctgtctatttccaattgattttgagtatgaaatggtgcaa 323
Query: 124 attgccactgggaaaaatccttccttcataaactgtcaaacat---aggagagaaaaatt 180
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 324 attgcctctgggaaaaatccttccttcataaactgtcaaacatagaaggagagaaaattt 383
Query: 181 tgaaagtaaccaaccatgggccttgttagccaacacaggccaggttggaacctttcgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaaagtaaccaaccatgggccttgttagccaacacaggccaggttggaacctttcgttt 443
Query: 241 cttcctttacaacttaagttccttttgagcatctcctgagccagcaggcacagctgcagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttcctttacaacttaagttccttttgagcatctcctgagccagcaggcacagctgcagt 503
Query: 301 ccctggatgcttagagttcatcacacgggatcttcagccttcctcatcttcctgaagaag 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 504 ccctggatgcttagagttcatcacactggatcttcagccttcctcatcttcctgaagaag 563
Query: 361 gtgaggtgttaggaccacctttgcttcactccttcctgacaaccgtttttgattatgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtgaggtgttaggaccacctttgcttcactccttcctgacaaccgtttttgattatgtca 623
Query: 421 ctcacagaacaggaatcacggcgccaccttctcaggttctagtgtgctctctctcctctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 624 ctcacagaacaggaatcacggcgccaccttctcaggttctagtgtgctctctc--ctctc 681
Query: 481 tctctctctctctctttctctctctctctctctctctct 519
||||||||||||||| |||||||||| ||||||||||||
Sbjct: 682 tctctctctctctctctctctctctccctctctctctct 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 923
Length adjustment: 10
Effective length of query: 510
Effective length of database: 913
Effective search space: 465630
Effective search space used: 465630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_f16.g1 MSMg01no362_f16.g1 CHROMAT_FILE:
MSMg01no362_f16.g1 PHD_FILE: MSMg01no362_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:41 2005
(422 letters)
>mm_chr16_29656528_29657349
Length = 822
Score = 754 bits (390), Expect = 0.0
Identities = 414/422 (98%)
Strand = Plus / Minus
Query: 1 tctgagccatctgttcaaatgacgagctcatcttgccatttctgtgtatcgtgtaccgag 60
||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 622 tctgagccatctgttcaaacgacgagctcatctcgccatttctgtgtatcgtgtaccgag 563
Query: 61 ctcccaatacctcacacgccatcactttccttcctccgagaactttgtagaggagctact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctcccaatacctcacacgccatcactttccttcctccgagaactttgtagaggagctact 503
Query: 121 ctggaaagtggtttgttaatcagactggcttccttaagtcttattttgtcaacgtcacaa 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctggaaagtggtttgttaatcggactggcttccttaagtcttattttgtcaacgtcacaa 443
Query: 181 attgctgtacatccataatatgggaacagttctgctagcggtaaagctacaaaacccaac 240
|||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 442 attgctgtacatccataaaatgggaacagttctgctagcgataaagctacaaaacccaac 383
Query: 241 acatattggacccgttgctctggatttgagtattctcaaccaagtgccacaggcacaatc 300
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 382 acatattggacccgttgctctggatttgagtattctcaaccaagtgtcacaggcacaagc 323
Query: 301 ctttgatccgatgccgaccatgagatgcttcagaggagttctagacggatctcacattgc 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 322 ctttgatccgatgccgaccatgagatgcttcagaggggttctagacggatctcacattgc 263
Query: 361 tcacggctagtttgtagtactaccctttgcagtgctgagcctagtttgacctttgacagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcacggctagtttgtagtactaccctttgcagtgctgagcctagtttgacctttgacagg 203
Query: 421 cc 422
||
Sbjct: 202 cc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
