Query= MSMg01no363_e17.b1 MSMg01no363_e17.b1 CHROMAT_FILE:
MSMg01no363_e17.b1 PHD_FILE: MSMg01no363_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:57 2005
(532 letters)
>mm_chr16_32831330_32832261
Length = 932
Score = 971 bits (502), Expect = 0.0
Identities = 527/542 (97%), Gaps = 12/542 (2%)
Strand = Plus / Minus
Query: 1 gcatgcatgtggatgtctgagggcaaccatgtggatcctggggtttcaactcaagaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 gcatgcatgtggatgtctgagggcaaccatgtggatcctggggtttcaactcaagaccct 831
Query: 61 gtggctggcagcggtcacctttacctctggagccatgttgccaacccctg---------- 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gtggctggcagcggtcacctttacctctggagccatgttgccaacccctgtttttttttt 771
Query: 111 gttttttttggtttttttttttttgtattttataaattttcccagtcagtaataattgcc 170
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 gttttttttg--ttttttttttttgtattttataaattttcccagtcagtaataattgcc 713
Query: 171 ttattctatgaaaagcatcaaaatgcttcaaataaattctcctcgaaaaacatatttgct 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ttattctatgaaaagcatcaaaatgcttcaaataaattctcctcgaaaaacatatttgct 653
Query: 231 ttgaaaatacgtttgtttttgttcaaaagattaataagaatgtttataattgttttaaac 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ttgaaaatacgtttgtttttgttcaaaagattaataagaatgtttataattgttttaaac 593
Query: 291 ttactaggaaggtgcagacttctttctgttctctacagaacactttcctccttgtctgtt 350
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 592 ttactaggaaggtgcagacttctttctgttctctccagaacactttcctccttgtctgtt 533
Query: 351 ttagacttggtattgttttatcattgtgctcaattagtggtccacccacatcaacttagt 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ttagacttggtattgttttatcattgtgctcaattagtggtccacccacatcaacttagt 473
Query: 411 catctgcttgaactaacttgagtcatcgggtgcccctcgggctcagtaaagtcagcatgt 470
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 472 catctgcttgaactaacttgagtcatcgggtgcctctcgggctcagtaaagtcagcatgt 413
Query: 471 tagatgggtgtcaggcccctaccccctgggctgtcaggactgcctccactctgctctggg 530
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 412 tagatgggtgtcaggcccctaccccctgggctatcaggactgcctccactctgctctggg 353
Query: 531 gt 532
||
Sbjct: 352 gt 351
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_e17.g1 MSMg01no363_e17.g1 CHROMAT_FILE:
MSMg01no363_e17.g1 PHD_FILE: MSMg01no363_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:57 2005
(363 letters)
>mm_chr16_32670304_32671066
Length = 763
Score = 640 bits (331), Expect = 0.0
Identities = 355/367 (96%), Gaps = 9/367 (2%)
Strand = Plus / Plus
Query: 1 tccaggaatactggaaggcacaagcaatctaaagggcatgtacttggtgggggattaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccaggaatactggaaggcacaagcaatctaaagggcatgtacttggtgggggattaaaa 260
Query: 61 ggcttcctggaggacttgctgttaagtttaaaacatatggcaagcagccaggccaggatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcttcctggaggacttgctgttaagtttaaaacatatggcaagcagccaggccaggatg 320
Query: 121 gtcagtaggcttatctgtgtagagctggcggcaggcgggaatagattgcaccgtatcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcagtaggcttatctgtgtagagctggcggcaggcgggaatagattgcaccgtatcttg 380
Query: 181 taggcagtgactaactagtgacctccacgttggtgcttagcctgccttgggtccttgctg 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 taggcagtgactaactagtgacctccacgttgctgcttagcctgccttgggtccttgctg 440
Query: 241 gtttt----attctttgctgagatcgtggagtctcctagtgccagaggcagctaaagggg 296
| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 g----gcagatcctttgctgagatcgtggagtctcctagtgccagaggcagctaaagggg 496
Query: 297 tagcaaggagaggtcccaaagaagccgtccctttgacctttggttttttttttttttttt 356
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 497 tggcaaggagaggtcccaaagaagccgtccctttgacctttg-ttttttttttttttttt 555
Query: 357 ttttttt 363
|||||||
Sbjct: 556 ttttttt 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
