Query= MSMg01no363_f13.b1 MSMg01no363_f13.b1 CHROMAT_FILE:
MSMg01no363_f13.b1 PHD_FILE: MSMg01no363_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:01 2005
(541 letters)
>mm_chr16_33793471_33794411
Length = 941
Score = 1025 bits (530), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Minus
Query: 1 ggcagatgcctttacctctgagtcatcttctgggccctcccctccccaactccccaccat 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggcagatgcctttaactctgagtcatcttctgggccctcccctccccaactccccaccat 557
Query: 61 ttgactgcaaagaattctattttctctacctgctgttccaagaatacctgaaaagtcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttgactgcaaagaattctattttctctacctgctgttccaagaatacctgaaaagtcctt 497
Query: 121 tcatgttttctccaactatttatgacttgacttgtgtcatcttttgctgtggactcccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tcatgttttctccaactatttatgacttgacttgtgtcatcttttgctgtggactcccac 437
Query: 181 actgggcttttcctaatggtcacttctagaaacttctagagctaacgtttccaagcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 actgggcttttcctaatggtcacttctagaaacttctagagctaacgtttccaagcttcc 377
Query: 241 ctccatctcacatatcactttaactggacatagaccccagttgtcatgctcctattagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctccatctcacatatcactttaactggacatagaccccagttgtcatgctcctattagaa 317
Query: 301 gcaggcttgaaggttattgacggtaggctccctttcccataaccaccttggcccaccgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcaggcttgaaggttattgacggtaggctccctttcccataaccaccttggcccaccgtc 257
Query: 361 tgtcgtgggtccaattttaacagaggccaatttgaaattccacaagcaaagagaaaactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgtcgtgggtccaattttaacagaggccaatttgaaattccacaagcaaagagaaaactt 197
Query: 421 gggaagcagaagaggcagacagatctctgtgagttcaaggccagcctactctacagagag 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gggaagcagaagagacagacagatctctgtgagttcaaggccagcctactctacagagag 137
Query: 481 agttccaggccggccagggttgcctagttaagactgtctttaanaaacaaaacaaaacaa 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 136 agttccaggccggccagggttgcctagttaagactgtctttaaaaaacaaaacaaaacaa 77
Query: 541 t 541
|
Sbjct: 76 t 76
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_f13.g1 MSMg01no363_f13.g1 CHROMAT_FILE:
MSMg01no363_f13.g1 PHD_FILE: MSMg01no363_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:01 2005
(457 letters)
>mm_chr16_33641981_33642840
Length = 860
Score = 839 bits (434), Expect = 0.0
Identities = 453/460 (98%), Gaps = 3/460 (0%)
Strand = Plus / Plus
Query: 1 cttctacagtaattctgccaggcatggtggctcattcctgagtctcggcattctgggggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cttctacagtaattctgccaggcatggtggctcattcctgagtctcggcactctgggggc 260
Query: 61 tgaggcaaggggattttgacagcctggccttcacagctagagtctatctcaaaagaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaggcaaggggattttgacagcctggccttcacagctagagtctatctcaaaagaaaaa 320
Query: 121 agacagttgaaccatcatccattcaaaccagtggtaaatcttgacagattttgtttaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacagttgaaccatcatccattcaaaccagtggtaaatcttgacagattttgtttaaat 380
Query: 181 ccacagttaggagatttattaagtatttcttactcacaaactcttaaatgcctggagatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccacagttaggagatttattaagtatttcttactcacaaactcttaaatgcctggagatt 440
Query: 241 ttaaaagggcaattcaccattcacatacggattcagaactttgaatattataactc-gta 299
|||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||
Sbjct: 441 ttaaaagggcaattcaccattcacatacagattcagaactttgagtattataactcagta 500
Query: 300 agcacacgatgaaatcaaatgagtttcgagaccatgaagatgtctttggagggg--tgaa 357
||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 501 agcacacgatgaaatcaaatgagtttcgagaccatgaagatgtctttgggggggggtgaa 560
Query: 358 tggctcatttgttcagccccatgtatggggtgtctgcattctgtggagcattttcagtgc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggctcatttgttcagccccatgtatggggtgtctgcattctgtggagcattttcagtgc 620
Query: 418 tggaagagcatgcttggcaggaacaggaagggctttggtg 457
||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggaagagcatgcttggcaggaacaggaagggctttggtg 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 860
Length adjustment: 10
Effective length of query: 447
Effective length of database: 850
Effective search space: 379950
Effective search space used: 379950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
