Query= MSMg01no365_b06.b1 MSMg01no365_b06.b1 CHROMAT_FILE:
MSMg01no365_b06.b1 PHD_FILE: MSMg01no365_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:29 2005
(183 letters)
>mm_chr16_26277506_26278088
Length = 583
Score = 325 bits (168), Expect = 1e-93
Identities = 174/176 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaggcgagctcagtgtctgcctagcgacacagcttgcaactgtgatgatttaca 63
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaggtgagctcagtgtctgcctagcgacacagcttgcaactgtgatgatttaca 263
Query: 64 tcatttctgaatttgctgaaataaattttaaaaatctgaaactttgtttttgtattttca 123
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcacttctgaatttgctgaaataaattttaaaaatctgaaactttgtttttgtattttca 323
Query: 124 aaagtgttttcaatggtgacataaaaatccatttaaaaattccaataggaacactt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaagtgttttcaatggtgacataaaaatccatttaaaaattccaataggaacactt 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no365_b06.g1 MSMg01no365_b06.g1 CHROMAT_FILE:
MSMg01no365_b06.g1 PHD_FILE: MSMg01no365_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:29 2005
(516 letters)
>mm_chr16_26371799_26372714
Length = 916
Score = 669 bits (346), Expect = 0.0
Identities = 430/490 (87%), Gaps = 53/490 (10%)
Strand = Plus / Minus
Query: 47 tatgctaagaaaattgctttaagg-aaaag-------------------gtatgtgtata 86
||||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 916 tatgctaagcaaattgctttaaggaaaaagtgtatgtgtatgtgtatgtgtatgtgtatg 857
Query: 87 tgtatgtgtatgtgtgtatatgtgtatctgtgtgtttgtgcccgtgcatgcatgcattgg 146
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 856 tgtatgtgtatgtgtgtatatgtgtgtctgtgtgtttgtgcccgtgcatgcatgcattgg 797
Query: 147 gtgtatcagatagtggactgcattttcaaaaggaaaataaaatcccaaaagacaatatat 206
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 796 gtgtgtcagatagtggactgcattttcaaaaggaaaataaaaacccaaaagacaata--- 740
Query: 207 atatgtatatatatccccttcaactaaaaatgcagtggaaagcacacagatctacacaga 266
||||||||| |||||||||||||| |||||||
Sbjct: 739 -----tatatatat---------------atgcagtggaaagc----------acacaga 710
Query: 267 tctaagagtgtactagaaacctgccctgtggcactctccggttagctcttctctaatcta 326
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 709 tctaagagtgtactagaaacctgccctgaggcactctccggttagctcttctctaatcta 650
Query: 327 taaagtttcaacatctctgagacccatgggagaaatgggagaaatctaatggaatgacct 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 taaagtttcaacatctctgagacccatgggagaaatgggagaaatctaatggaatgacct 590
Query: 387 taaggaacagaagggagcagagggcccctaaaagagaaggaactatcagacaagaggtgc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 taaggaacagaagggagcagagggcccctaaaagagaaggaactatcagacaagaggtgc 530
Query: 447 ccaagggtgaagggaatatagaaatatcgagttagacacatttcctgaataaaatactga 506
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ccaagggtgaagggaatatagaaatatcgagttagacacatttcctgaataaaatactgg 470
Query: 507 gaatatacta 516
||||||||||
Sbjct: 469 gaatatacta 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
