Query= MSMg01no365_g14.b1 MSMg01no365_g14.b1 CHROMAT_FILE:
MSMg01no365_g14.b1 PHD_FILE: MSMg01no365_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:54 2005
(249 letters)
>mm_chr16_51816128_51816776
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 cattattatttatatcagcattccagaagtgaaatgtatacatacaaatccataaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cattattatttatatcagcattccagaagtgaaatgtatacatacaaatccataaatatt 390
Query: 61 tatataggaattatttgagaggaaactacatgtaagaaacaattacatcaagttcatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tatataggaattatttgagaggaaactacatgtaagaaacaattacatcaagttcatata 330
Query: 121 gtcaatgctgtcaaaggatcaattcttcagctgctctatagcttgccgctatttcactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtcaatgctgtcaaaggatcaattcttcagctgctctatagcttgccgctatttcactca 270
Query: 181 caattccagcaaattgttacgtgggcaatggctaactgaccaaagaagcttgcaagaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 caattccagcaaattgttacgtgggcaatggctaactgaccaaagaagcttgcaagaagg 210
Query: 241 tcaaaagat 249
|||||||||
Sbjct: 209 tcaaaagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no365_g14.g1 MSMg01no365_g14.g1 CHROMAT_FILE:
MSMg01no365_g14.g1 PHD_FILE: MSMg01no365_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:54 2005
(512 letters)
>mm_chr16_51644337_51645248
Length = 912
Score = 768 bits (397), Expect = 0.0
Identities = 454/507 (89%), Gaps = 52/507 (10%)
Strand = Plus / Plus
Query: 1 ttacatcaaaaaagtgaattgtgggggaatgaaatatgaaattaaaaggccatttgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ttacatcaaaaaagtgaattgtgggggaatgaaatatgaaattaaaaggtcatttgttta 260
Query: 61 aaggcttaggaagacatccatactgaaacttatttagacaagagtgacaaggtagcacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggcttaggaagacatccatactgaaacttatttagacaagagtgacaaggtagcacat 320
Query: 121 ggaaaatgtaatcataaatttttgaaattaaatatttctgagccagaaaagttaaaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaaatgtaatcataaatttttgaaattaaatatttctgagccagaaaagttaaaaagc 380
Query: 181 tgtgctttatgaaagtggtgggtggaaggaataggatcaggtgaaatctgaaatacggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgctttatgaaagtggtgggtggaaggaataggatcaggtgaaatctgaaatacggtt 440
Query: 241 tttgaatggaatttctcaaagactacaaaatgttcaaactgcttactggcagagacctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgaatggaatttctcaaagactacaaaatgttcaaactgcttactggcagagacctga 500
Query: 301 ttctctctctctttctttctttctttctttctttctttctttctttctttctttctttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctctctctctttctttctttctttctttctttctttctttctttctttctttctttct 560
Query: 361 ttctttctttctttctttctttctttctttctttctttctttctttcttccttccttcct 420
|||||||||
Sbjct: 561 ttctttctt--------------------------------------------------- 569
Query: 421 tccttccttccttccttccttccttccttccttccttccttctttctcttctttcttctt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 -ccttccttccttccttccttccttccttccttccttccttctttctcttctttcttctt 628
Query: 481 ttttcttttctttttttttgggggggg 507
|||||||||||||||||||||||||||
Sbjct: 629 ttttcttttctttttttttgggggggg 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 91
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
