Query= MSMg01no365_h03.b1 MSMg01no365_h03.b1 CHROMAT_FILE:
MSMg01no365_h03.b1 PHD_FILE: MSMg01no365_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:57 2005
(332 letters)
>mm_chr16_92779120_92779851
Length = 732
Score = 611 bits (316), Expect = e-179
Identities = 328/332 (98%)
Strand = Plus / Plus
Query: 1 tccaggtccactctgctgagcactgtgatatcacctactgcttttagagtcttcctgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccaggtccactctgctgagcactgtgatatcacctactgcttttagagtcttcctgaac 260
Query: 61 ctggctttgggacttctcctttcctccccagctactaaactccttctgcctaggcccctg 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtctttgggacttctcctttcctccccagctactaaactccttctgcctaggcccctg 320
Query: 121 ggtcctactgatgagggaccacctgcaccaagagactgtgacctgtagtttgtgatttct 180
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 ggtcctactgatgagtgaccacctgcaccaagagactgtgacctgttgtttgtgatttct 380
Query: 181 acagaggacaaatttcctacttctccctgggctgtagagctaagaaatggagattcaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagaggacaaatttcctacttctccctgggctgtagagctaagaaatggagattcaaca 440
Query: 241 ccctgtgatttgcttcggacagatttctcccacacctgccatgccatctcatgcctttga 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgtgatttgctttggacagatttctcccacacctgccatgccatctcatgcctttga 500
Query: 301 cactctgcatgtgacagtcccttgaatatgca 332
||||||||||||||||||||||||||||||||
Sbjct: 501 cactctgcatgtgacagtcccttgaatatgca 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_h03.g1 MSMg01no365_h03.g1 CHROMAT_FILE:
MSMg01no365_h03.g1 PHD_FILE: MSMg01no365_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:57 2005
(472 letters)
>mm_chr16_92951429_92952300
Length = 872
Score = 826 bits (427), Expect = 0.0
Identities = 452/469 (96%), Gaps = 14/469 (2%)
Strand = Plus / Minus
Query: 1 tccaggcctaagccttctggtatgatctggtttggtcctgctccagcccggggaaggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tccaggcctaagccttctggtatgatctggtttggtcctgctccagcccggggaaggcat 763
Query: 61 acaggattctcaacatttggggaataggcaaattcttgtgcgatctagaatctctctctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 acaggattctcaacatttggggaataggcaaattcttgtgcgatctagaa---------- 713
Query: 121 tctctctctctctctctctctctctctctctctctctctctctctctgggccacagcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 ----tctctctctctctctctctctctctctctctctctctctctctgggccacagcatg 657
Query: 181 cctctcctaattgcaatttcccagcatcccactttacaacaaacagcagccagaagtttg 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 656 cctctcctaattgcaatttcccagcattccactttacaacaaacagcagccagaagtttg 597
Query: 241 ccgttcttgtattttctccaatgcagagtcatctgttttccttgtggctatttccctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ccgttcttgtattttctccaatgcagagtcatctgttttccttgtggctatttccctctt 537
Query: 301 gtgttctcaccgcattggcctccagtgctggagaatgccagagccacgtttccagtacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gtgttctcaccgcattggcctccagtgctggagaatgccagagccacgtttccagtacat 477
Query: 361 tgaccatgtcacttctatggagaatctgtgctccagagaacgaatgcattgcttgagaga 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 476 tgaccatgtcacttctatggagaatctgtgctccagagaacgaacgcattgcttgagaga 417
Query: 421 gtggaaatatcccatacttgttcatatccatatgtgctgtccttgcatg 469
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ggggaaatatcccatacttgttcatatccatatgtgctgtccttgcatg 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 69
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
