Query= MSMg01no366_f13.b1 MSMg01no366_f13.b1 CHROMAT_FILE:
MSMg01no366_f13.b1 PHD_FILE: MSMg01no366_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:10 2005
(453 letters)
>mm_chr16_21638373_21639225
Length = 853
Score = 830 bits (429), Expect = 0.0
Identities = 447/453 (98%)
Strand = Plus / Plus
Query: 1 gtctcgaactctgaaatccgcctgcctctgcctcatgagtgctgggattaaaggtgtgcg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctcgaactctgaaattcgcctgcctctgcctcatgagtgctgggattaaaggtgtgcg 260
Query: 61 ccaccacacccggctcttcggtgtcttataaagtctgcagaagtgtgacacatacttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaccacacccggctcttcggtgtcttataaagtctgcagaagtgtgacacatacttttt 320
Query: 121 ccagtgtcatgtttcctaccaattagtattgaggccagcggttcttagaaagagtcaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagtgtcatgtttcctaccaattagtattgaggccagcggttcttagaaagagtcaagg 380
Query: 181 cagctttaacactcaggttgtggtgggttcctcctccttctctggcaagaaccagtgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagctttaacactcaggttgtggtgggttcctcctccttctctggcaagaaccagtgaaa 440
Query: 241 tgagtgtattcttatgagagggtgcccaagaggccttcagagccgcctcagcccgccatg 300
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagtgtagccccatgagagggtgcccaagaggccttcagagccgcctcagcccgccatg 500
Query: 301 ttgtcaagtgcatcaagaactgaggtagccataacctagaccagctgtgacatcatgttt 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 ttgtcaagtgcatcaagaactgaggtagccatatcctagaccagctgtgacatcatgttt 560
Query: 361 gggaccctggaaacccaggagctgtgagccctcttctctcggctgcttctttccggagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggaccctggaaacccaggagctgtgagccctcttctctcggctgcttctttccggagct 620
Query: 421 tcaaacttccttttcctcccgctggaaaacagc 453
|||||||||||||||||||||||||||||||||
Sbjct: 621 tcaaacttccttttcctcccgctggaaaacagc 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_f13.g1 MSMg01no366_f13.g1 CHROMAT_FILE:
MSMg01no366_f13.g1 PHD_FILE: MSMg01no366_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:10 2005
(482 letters)
>mm_chr16_21813869_21814750
Length = 882
Score = 694 bits (359), Expect = 0.0
Identities = 391/403 (97%), Gaps = 3/403 (0%)
Strand = Plus / Minus
Query: 80 gaagtaatacaggaacaagaggagaataccaacagggtgtcagaaatcacataaaaaaac 139
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 882 gaagtaatacaggaacaa---gagaataccaacagggtgtcagaaatcacataaaagaac 826
Query: 140 caaaggaaaaaaatacacaactggagaactcagtaactgagctgaaaaactcaacgggtt 199
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 825 caaaggaaaaaaatacacaactggagaactcagtaactgagctgaaaaactcaatgggtt 766
Query: 200 ttcaacattacatttgatcaaataactcagtaaacttgaagacagacgatttatgatcat 259
|||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 765 ttcaacattacatttgatcaaataactcagtaaactcgaagacagacgatttaagatcat 706
Query: 260 gaagtagaagggacagaaggaaacgtgacagtcgagggactgagacaccgtcaagatggc 319
|||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 705 gaagtagaagggacagaaggaaacgtgacagtcgagggcctgagacactgttaagatggc 646
Query: 320 caacacacacagagttacagtgtaagagagggacagtgtaaggtggcagacattgctcac 379
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 645 caacacacacagagttacagtgtaagagagggacagtgtaaggtggcagacatcgctcac 586
Query: 380 gtccccagtcctgctgactgagtgaagggaagcaggcctctacatcctcattacctctct 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtccccagtcctgctgactgagtgaagggaagcaggcctctacatcctcattacctctct 526
Query: 440 atttaccgagtatgaagaggtatgtatgtgctatgatacacat 482
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 525 atttaccgcgtatgaagaggtatgtatgtgctatgatacacat 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
