Query= MSMg01no366_l09.b1 MSMg01no366_l09.b1 CHROMAT_FILE:
MSMg01no366_l09.b1 PHD_FILE: MSMg01no366_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:38 2005
(484 letters)
>mm_chr16_58758365_58759248
Length = 884
Score = 915 bits (473), Expect = 0.0
Identities = 479/481 (99%), Gaps = 2/481 (0%)
Strand = Plus / Plus
Query: 5 gaattcttattgta-ttccttggcatctttatccaaaaataaattgctcactagtgcatg 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttattgtagtt-cttggcatctttatccaaaaataaattgctcactagtgcatg 263
Query: 64 gatttatttatggatactgttccatgcgtttggtatttttgtgactatttttatgccagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatttatttatggatactgttccatgcgtttggtatttttgtgactatttttatgccagc 323
Query: 124 acattttattttgatcacagtagctttgttatagattatggaaacaagtaggacatgaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acattttattttgatcacagtagctttgttatagattatggaaacaagtaggacatgaat 383
Query: 184 tgctcagatagacattagaaacatcctaagttcatgtgtttgatttcaaatgaccaagga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgctcagatagacattagaaacatcctaagttcatgtgtttgatttcaaatgaccaagga 443
Query: 244 aattataaaatatacgagtataataataatatactacattcattttcatagagctttaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aattataaaatatacgagtataataataatatactacattcattttcatagagctttaga 503
Query: 304 gacacagatgactttttttaatgcatgagtttagggtattagaaatgttcttatttgttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gacacagatgactttttttaatgcatgagtttagggtattagaaatgttcttatttgttt 563
Query: 364 tcccactatatttcaccattggtggctgagtgtattgactgtaatactgtgacaactgtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcccactatatttcaccattggtggctgagtgtattgactgtaatactgtgacaactgtt 623
Query: 424 tctgagcaattaactgtgatctcagagcatcaagagagcaggtggaaggaagaactttgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tctgagcaattaactgtgatctcagagcatcaagagagcaggtggaaggaagaactttgt 683
Query: 484 g 484
|
Sbjct: 684 g 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_l09.g1 MSMg01no366_l09.g1 CHROMAT_FILE:
MSMg01no366_l09.g1 PHD_FILE: MSMg01no366_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:38 2005
(415 letters)
>mm_chr16_58822256_58823070
Length = 815
Score = 795 bits (411), Expect = 0.0
Identities = 414/415 (99%)
Strand = Plus / Minus
Query: 1 atatactgggaaatgggaatggaacttgagaacagtcaatgaaaggagataagtactcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atatactgggaaatgggaatggaacttgagaacagtcaatgaaaggagataagtactcac 414
Query: 61 acataaacaatatgttatagaaaagtgaatcaaacattgccattgtaggataataaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acataaacaatatgttatagaaaagtgaatcaaacattgccattgtaggataataaaatg 354
Query: 121 aagtcccttgcctatttctatctaagcctgccaatatttccacacacttgcagaacagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aagtcccttgcctatttctatctaagcctgccaatatttccacacacttgcagaacagtg 294
Query: 181 ccctgcatatttatgcattcggtagcccagagtgctttcagtttcttaactaatatggaa 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 293 ccctgcatatttatgcattcggtagtccagagtgctttcagtttcttaactaatatggaa 234
Query: 241 caggagtactatttttgcttttgaattctttttattttttaactttaaactcttatggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 caggagtactatttttgcttttgaattctttttattttttaactttaaactcttatggca 174
Query: 301 actactgacagagctaaccacataaacaaaagcttatgtggatgtgcatcaccatgaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 actactgacagagctaaccacataaacaaaagcttatgtggatgtgcatcaccatgaaga 114
Query: 361 ttgaggagctttgaattagatccatagtttatattatttttcttttgtttttcag 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ttgaggagctttgaattagatccatagtttatattatttttcttttgtttttcag 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
