Query= MSMg01no367_e08.b1 MSMg01no367_e08.b1 CHROMAT_FILE:
MSMg01no367_e08.b1 PHD_FILE: MSMg01no367_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:22 2005
(468 letters)
>mm_chr16_93245720_93246587
Length = 868
Score = 851 bits (440), Expect = 0.0
Identities = 458/464 (98%)
Strand = Plus / Plus
Query: 5 gaattctcctctgttacactagtctattgcttttgactttggcctcacttaaattaccaa 64
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctctgttacactagtttattgcttttgactttggcctcacttaaattaccaa 264
Query: 65 gacaagcgtggaatgcacacaggtctggtgtcagaacacatgcaaatggcatctagtaca 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 265 gacaagcgtggaatgcacacaggtctggtgtcagaacacatgcaaatggcctctagtaca 324
Query: 125 gctctccgtagcgttcttgttcccatctgaagcatcctgagcacagactccggcagacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 gctctccgtagcgttcttgttcccatctgaagcatcctgagcacagactccagcagacat 384
Query: 185 gcttgctcagcatcctgagctctaattgtggcattgtggggcttctctaagccacatctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcttgctcagcatcctgagctctaattgtggcattgtggggcttctctaagccacatctc 444
Query: 245 cacactcacccacattcatccctcaaaccgtttccaaaggcctagggcacaaatggtcag 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 cacactcacccacattcatccctcaaaccgtttccaaaggcctagggcccaaatggtcag 504
Query: 305 aaatcacttcctgcacaaacctcacttctcacaccagtttcctgtgttgtttactttaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaatcacttcctgcacaaacctcacttctcacaccagtttcctgtgttgtttactttaga 564
Query: 365 gtcatgatcaccacaaaacttaacagaagcaacttataggagaggaagatgactctaacc 424
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 565 gtcatgatcaccacaaaacttaacagacgcaacttataggagaggaagatgactctaacc 624
Query: 425 atcttcttcagaatgctttcgtccatcatgctggtaaagaatgt 468
||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 625 atcttcttcagaatgctttcgtccatcttgctggtaaagaatgt 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_e08.g1 MSMg01no367_e08.g1 CHROMAT_FILE:
MSMg01no367_e08.g1 PHD_FILE: MSMg01no367_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:22 2005
(490 letters)
>mm_chr16_93405962_93406853
Length = 892
Score = 909 bits (470), Expect = 0.0
Identities = 480/484 (99%), Gaps = 2/484 (0%)
Strand = Plus / Minus
Query: 1 atgcctctggctttaattcttcactgtgtgttcctgaaagcagtcgaaggtgctttgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 684 atgcctctggctttaattcttcactgtgtgttcctgaaagcagtcgaaggtgctttgttg 625
Query: 61 aaaactagaaaccaagcatgttggattgggtcaccactctaccaagttcctcccaaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaaactagaaaccaagcatgttggattgggtcaccactctaccaagttcctcccaaagtg 565
Query: 121 atgagcacgggccttgtggtatctcttatgttggaagatgggttcctgttttaaaattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atgagcacgggccttgtggtatctcttatgttggaagatgggttcctgttttaaaattgg 505
Query: 181 atcaagtttctattcctatttgaaggcagtttgtccttttgccttgggatcgaggcatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atcaagtttctattcctatttgaaggcagtttgtccttttgccttgggatcgaggcatag 445
Query: 241 aggagcaaagagtatcaatgccaggacataaagtagacttcagaatcatggatgagaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aggagcaaagagtatcaatgccaggacataaagtagacttcagaatcatggatgagaaac 385
Query: 301 aaagcatcgaagaggtcaggccagagtatgccttgctctgcttggctgggccatgggcag 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agagcatcgaagaggtcaggccagagtatgccttgctctgcttggctgggccatgggcag 325
Query: 361 ctgtttgtgagaggccatgccagtcaccttcatggttcagtgaccttgtgtcactgtgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgtttgtgagaggccatgccagtcaccttcatggttcagtgaccttgtgtcactgtgat 265
Query: 421 gaagtgagaatctgtctcatgtgttcatttattctccattt--ccccccccgcaccccca 478
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 gaagtgagaatctgtctcatgtgttcatttattctccatttccccccccccgcaccccca 205
Query: 479 cgcc 482
||||
Sbjct: 204 cgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 892
Length adjustment: 10
Effective length of query: 480
Effective length of database: 882
Effective search space: 423360
Effective search space used: 423360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
