XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAGAGACTAAGCCAACGGTAATGGAAAGCTGGAGAGAACCAAATGGAATA
GTTTGGAGACTAAGATGTAGTAACTATTGACTGCATATGTATTGGGGACA
CTGCTGGTGAGCATTCCAAAAGCAGACATACCTCAGTCCCCAGGAGGGAC
TTCACATGAGTCAATGAGCTGTTCTGGGGATGGGAGTATACATAGTACAT
GTATATTGTATAAACTTTTCATAGGATTTCAAGATAAAGTCTATGGAAAA
GAAGTTGGGTTAAGACCAATTCCTGAAGGCATTTTTATAATAATAGCATT
GTAAGCATAAGGCTACAAGTAGCAAAATGATAAAAGAGCCCAGAGGTTAT
CCCTACAAATTGAGGGGGACCTCCTTATATATGTTTTTCTGCGTTCTCTG
GTTCTTGGTATGCTTTGTGTCTGAAAGAANAGTAATAAAAACTTGTTCCT
AATCAGTGATCTTACATTTTCTGGGCTTTTACTGGTCTAAAACCTCTTCC
ATTTCCCCTAGCTCTTTCTCAGAAAAGANAAATTCCTTACCCCCGAAAAG
GCAGCTGATGCATGGTTTAAGAATTTGCCCCCAGTATTGAAGAATTGCTG
CGCTTCTCTAACCCCGCCCTTAACTTGGGTTTCCGCCCCTTTCAAGGTCG
CCCCCCCCCCCCTCCCACCAACTGGGAAAAGTATGTTCCCCCCCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTAACACACTCAGTCAACAGAAA
CCCTACATTATGTTGCTGTAGGCTGGAGCTCACTCCTGGCTCCCAAACCC
ATACAGCTTTTATTTTTCATGATGGGCAGAAGTTTCTATGAAGTGATTCA
CTTGAGCAGAATGATACTAGGCAACAGTGGGTACATAGTCCCGAGGCCAA
GAGGATTGATCTAATCCAGAGAAGCATGACAGGTATTTGAAGCCTACAGA
CACTTTAATCTGCTTCTAATGATCTCTGGTCTCGGGACTTTTCTTTTTTT
TTTAATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCGG
GACCTTTGGAAGAGCAGTCGGCACTCTTAACCACTGAGCCATCTCACCAG
CCCTCGGGACTTTTCCAAGCCCCTATACTTCCTGATTTCTACCATGTCAT
AGAGGTTTCAGGTGAAATGAGCACCCAGGCCCCTCATATTGGGGAAGTAT
TTTGAGGGGAGACCGCAACCCCCCCCCCCCCCCCGAATACCACCTCCTGA
AGGGGAGATTGGAGCCCTAAAACCCCTTGTCCCCCTTTATAAGCACCACC
ACCTTTTCCCCAATTTGGAAAACAACACCTGCCGGCGGCCCTCTTCCGCC
TCTGGCCCCCCCGGGCGAGCCCCTCTCCTTTCTTCCCCCCAAGCCCCTCC
GCCTATTCGCCCCCCC

Query= MSMg01no369_m24.b1 MSMg01no369_m24.b1 CHROMAT_FILE:
MSMg01no369_m24.b1 PHD_FILE: MSMg01no369_m24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:38 2005
         (411 letters)



>mm_chr16_14315976_14316786
          Length = 811

 Score =  766 bits (396), Expect = 0.0
 Identities = 405/408 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagagactaagccaacggtaatggaaagctggagagaaccaaatggaatagttt 63
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 611 ggaattcagagactaagccaacggtaatggaaatctggagagaaccaaatggaatagttt 552

                                                                       
Query: 64  ggagactaagatgtagtaactattgactgcatatgtattggggacactgctggtgagcat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggagactaagatgtagtaactattgactgcatatgtattggggacactgctggtgagcat 492

                                                                       
Query: 124 tccaaaagcagacatacctcagtccccaggagggacttcacatgagtcaatgagctgttc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tccaaaagcagacatacctcagtccccaggagggacttcacatgagtcaatgagctgttc 432

                                                                       
Query: 184 tggggatgggagtatacatagtacatgtatattgtataaacttttcataggatttcaaga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tggggatgggagtatacatagtacatgtatattgtataaacttttcataggatttcaaga 372

                                                                       
Query: 244 taaagtctatggaaaagaagttgggttaagaccaattcctgaaggcatttttataataat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 taaagtctatggaaaagaagttgggttaagaccaattcctgaaggcatttttataataat 312

                                                                       
Query: 304 agcattgtaagcataaggctacaagtagcaaaatgataaaagagcccagaggttatccct 363
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agcattgtaagcataagactacaagtagcaaaatgataaaagagcccagaggttatccct 252

                                                           
Query: 364 acaaattgagggggacctccttatatatgtttttctgcgttctctggt 411
           ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 251 acaaattgagggggacctccttatatatgttcttctgcgttctctggt 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space:   322404
Effective search space used:   322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no369_m24.g1 MSMg01no369_m24.g1 CHROMAT_FILE:
MSMg01no369_m24.g1 PHD_FILE: MSMg01no369_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:39 2005
         (365 letters)



>mm_chr16_14275217_14275981
          Length = 765

 Score =  698 bits (361), Expect = 0.0
 Identities = 364/365 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctaacacactcagtcaacagaaaccctacattatgttgctgtaggctggagctcactcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaacacactcagtcaacagaaaccctacattatgttgctgtaggctggagctcactcc 260

                                                                       
Query: 61  tggctcccaaacccatacagcttttatttttcatgatgggcagaagtttctatgaagtga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggctcccaaacccatacagcttttatttttcatgatgggcagaagtttctatgaagtga 320

                                                                       
Query: 121 ttcacttgagcagaatgatactaggcaacagtgggtacatagtcccgaggccaagaggat 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ttcacttgagcagaatgatactaggcagcagtgggtacatagtcccgaggccaagaggat 380

                                                                       
Query: 181 tgatctaatccagagaagcatgacaggtatttgaagcctacagacactttaatctgcttc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatctaatccagagaagcatgacaggtatttgaagcctacagacactttaatctgcttc 440

                                                                       
Query: 241 taatgatctctggtctcgggacttttcttttttttttaatggatggttgtgagccaccat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatgatctctggtctcgggacttttcttttttttttaatggatggttgtgagccaccat 500

                                                                       
Query: 301 gtggttgctgggatttgaactcgggacctttggaagagcagtcggcactcttaaccactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggttgctgggatttgaactcgggacctttggaagagcagtcggcactcttaaccactg 560

                
Query: 361 agcca 365
           |||||
Sbjct: 561 agcca 565


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 765
Length adjustment: 9
Effective length of query: 356
Effective length of database: 756
Effective search space:   269136
Effective search space used:   269136
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)