Query= MSMg01no371_j04.b1 MSMg01no371_j04.b1 CHROMAT_FILE:
MSMg01no371_j04.b1 PHD_FILE: MSMg01no371_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:04 2005
(477 letters)
>mm_chr16_75711148_75712023
Length = 876
Score = 837 bits (433), Expect = 0.0
Identities = 466/477 (97%), Gaps = 1/477 (0%)
Strand = Plus / Minus
Query: 1 ccttgataacttccatgtgcttcctttctggcctctgaccatgagcttcccactattcca 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 676 ccttgataacttccatgtgcttcctttctggcctctgaccatgagcttcccacttttcca 617
Query: 61 ttgcttgactaagcatctccctttttctgcggcagcttcttcagtatttatggctggcga 120
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 616 ttgctcgactaagcatctccctttttctacggcagcttcttcagtatttatggctggtga 557
Query: 121 cggatcttcctaaccttgattctctagccacatagccgtttacatagacacttatcactc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tggatcttcctaaccttgattctctagccacatagccgtttacatagacacttatcactc 497
Query: 181 tgaaatcccttcaagcatcccccttttatatttattcactgtcatctcagtagactttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgaaatcccttcaagcatcccccttttatatttattcactgtcatctcagtagactttgt 437
Query: 241 gtggtaagtaaagtaaatgatccactcagtcattttaaactgggagcaaagcacactcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtggtaagtaaagtaaatgatccactcagtcattttaaactgggagcaaagcacactcct 377
Query: 301 taaacatcgagcttggaaaatgcagcatccatattttacatgttcgagaaaggggaaact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 376 taaacatcgagcttggaaaatgcagcatccatattttacatgttcgagaaagggg-aact 318
Query: 361 cctaaaggtaagatataaagctcaatagatgagtgtgtgcaggctgtccctgaaaatcaa 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 317 cctaaaggtaagatataaagctcaatagatgagtatgtgcaggctgtccctgaaaatcaa 258
Query: 421 aagcaaagagctgagacctagcggaaaaaaatggtcggggctatttctttcttccaa 477
||||||||||||||||||||| |||||||||| || ||||||||||||||||||||
Sbjct: 257 aagcaaagagctgagacctagtagaaaaaaatgttcagggctatttctttcttccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 876
Length adjustment: 10
Effective length of query: 467
Effective length of database: 866
Effective search space: 404422
Effective search space used: 404422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_j04.g1 MSMg01no371_j04.g1 CHROMAT_FILE:
MSMg01no371_j04.g1 PHD_FILE: MSMg01no371_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:04 2005
(500 letters)
>mm_chr16_75486963_75487858
Length = 896
Score = 911 bits (471), Expect = 0.0
Identities = 492/501 (98%), Gaps = 6/501 (1%)
Strand = Plus / Plus
Query: 1 agtctttttgttttttgttttttcttttaatgtgctaagaccaatgcttgcctttagtgt 60
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 agtctttttgttttttgttttttcttttaatgtgctaagac----gcttgcctttagtgt 256
Query: 61 gtgtcata-gggaaaaaaattacctctctggggcctagcagttacatttgtaagatttat 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtgtcataggggaaaaaaattacctctctggggcctagcagttacatttgtaagatttat 316
Query: 120 ggcttaacctcaggaagactttcagtaacttggtataaaatgtatacatttaatggaagg 179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 317 ggcttaacctcaggaagactttcagtaacttcgtataaaatgtatacatttaatggaagg 376
Query: 180 cacacgatgcttcttataagaatctgttccaagtcactgtgtataattaatggcttgtct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cacacgatgcttcttataagaatctgttccaagtcactgtgtataattaatggcttgtct 436
Query: 240 acatatttttcaaaaaaaacctattcgtgctgaattttaagtaggcattttcaatagcag 299
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acatatttttcaaaaaaaa-ctattcgtgctgaattttaagtaggcattttcaatagcag 495
Query: 300 aatgaatgtatctttgtgaagataccatttatctactataacacccaaagcataatggct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aatgaatgtatctttgtgaagataccatttatctactataacacccaaagcataatggct 555
Query: 360 agactttgatactccacagatttagaacggaactggaatacaaagctataagagactgtc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agactttgatactccacagatttagaacggaactggaatacaaagctataagagactgtc 615
Query: 420 ttgtcagcacaatgtgaataaagtcatcatagtatactggaatttggagtctcagactta 479
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 616 ttgtcagcacaatgtgaataaagtcatcatagtatgctggaatttggagtctcagactta 675
Query: 480 tcagtgtaaaattagagtaat 500
|| ||||||||||||||||||
Sbjct: 676 tctgtgtaaaattagagtaat 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 896
Length adjustment: 10
Effective length of query: 490
Effective length of database: 886
Effective search space: 434140
Effective search space used: 434140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
