TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTAAGATATCCAGATTAAATCCAGTGCCAACCTCAAAAATATGAAAGA
TCTTGAACAACCACCCTGATGGGGTAAAAATTCAAAGTGCACACTCACAA
TTATAGAAATTATACTATGGTTGGTATAGTTTTAATGTAAACATTTTGTC
CAATAATGAGAACTGCAACAACATGAGGCAGAATAGCACATCCATTTACA
AGGTTTGTTTGGGACCTCATAATGAGCTTGCAAAAGTTATTGCCTATTCT
AATAAGACTTCTAGTAACAGATATTTTATAGGGCTCTTGCACCATCGTAG
ACATAATACTACCTATGCCTAAACTTACAGCCTCTCAACACAGTAATTAA
TATCATGGCAATCCAGCTATTCCACAAAATTTGAAATGAATGAACTGCTT
GATTTTTCAAGTTTTAAATATGCAAATAAGATCCACAACATATGCAACCT
ACGTCAGACTAATATCAAACCTCTACAATTCCGAGGCAGCCTTGTTCTGA
ATGGACCGATGCATGTAGCTGTCAGCTATGGAATTTCACAGATGAGGGAA
ACCATAAACCTTCCCGACCACATATGTATCATGTACTATACACTGGAATC
TTTCCCTGTACCCGAAGTGATGGTACACCCCTATGACCCCTTATTATTTT
ATAATAATAAAGCACCCTTTCTACCTCGATTTTATTGATGGCTCTATGGC
C

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAGGCCCATACCTAAACATGAAAAAAG
CAATGTACAGCAAACCAGTAGTCAACATCAAAGCAAATGGTGAGAAGCTG
GAAGCATTCCCACTAAAATCAGGGACTCGACAAGGCTGCACACTTTCTCC
CTACCTATTCAGTATAGGGCTTGAAGTCCTAGCCAGAGCAATTCGACAAC
AAAAGGAGATCAAGGGGATACAAATTGGAAAGGAATAGGTCAAAATATCA
AATTTTGCAGATGATGTGATAGTATATATAAGTGACCCTAAAAATTATAC
CAGAGCACTCCTAAACCTGATAAACAGCTTCAATGAAGTAGCTGGATATA
AAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGGACAAACAT
GCTGAGAAAGAAATGAGGAAAAGAACACCCTTCACAAGAGTTACAAATAG
TATAATATACCTTGGTGTGACTGTAACTAAGGAAGTGAAAGATCTGTATG
ATAAGAAGTTCAAGTCTCTGAAGAAAGAAATCAAAGAAGATCTCAGAAGA
TGGAAAGATCTCCCATGCTCATGGATTGGCCGGATCAATATAGTAAAAAT
GGCTATCCTTGCCAAAAGCAATCCACAGATTTAATGCGATCCCCTATCAA
AATTATCACCCCAATTCTTTTATGGAATAAAAAGAGAAATCCGGCCACTC
CCG

Query= MSMg01no372_n04.b1 MSMg01no372_n04.b1 CHROMAT_FILE:
MSMg01no372_n04.b1 PHD_FILE: MSMg01no372_n04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:39 2005
         (483 letters)



>mm_chr16_63553756_63554638
          Length = 883

 Score =  895 bits (463), Expect = 0.0
 Identities = 475/479 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttaagatatccagattaaatccagtgccaacctcaaaaatatgaaagatcttga 64
           |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gaattcttaagagataaagattaaatccagtgccaacctcaaaaatatgaaagatcttga 624

                                                                       
Query: 65  acaaccaccctgatggggtaaaaattcaaagtgcacactcacaattatagaaattatact 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 acaaccaccctgatggggtaaaaattcaaagtgcacactcacaattatagaaattatact 564

                                                                       
Query: 125 atggttggtatagttttaatgtaaacattttgtccaataatgagaactgcaacaacatga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atggttggtatagttttaatgtaaacattttgtccaataatgagaactgcaacaacatga 504

                                                                       
Query: 185 ggcagaatagcacatccatttacaaggtttgtttgggacctcataatgagcttgcaaaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggcagaatagcacatccatttacaaggtttgtttgggacctcataatgagcttgcaaaag 444

                                                                       
Query: 245 ttattgcctattctaataagacttctagtaacagatattttatagggctcttgcaccatc 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 443 ttattgcctattctaataagacttctagtaacagacattttatagggctcttgcaccatc 384

                                                                       
Query: 305 gtagacataatactacctatgcctaaacttacagcctctcaacacagtaattaatatcat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtagacataatactacctatgcctaaacttacagcctctcaacacagtaattaatatcat 324

                                                                       
Query: 365 ggcaatccagctattccacaaaatttgaaatgaatgaactgcttgatttttcaagtttta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggcaatccagctattccacaaaatttgaaatgaatgaactgcttgatttttcaagtttta 264

                                                                      
Query: 425 aatatgcaaataagatccacaacatatgcaacctacgtcagactaatatcaaacctcta 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aatatgcaaataagatccacaacatatgcaacctacgtcagactaatatcaaacctcta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space:   412929
Effective search space used:   412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)