Query= MSMg01no372_o05.b1 MSMg01no372_o05.b1 CHROMAT_FILE:
MSMg01no372_o05.b1 PHD_FILE: MSMg01no372_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:44 2005
(538 letters)
>mm_chr16_50247468_50248404
Length = 937
Score = 928 bits (480), Expect = 0.0
Identities = 523/544 (96%), Gaps = 13/544 (2%)
Strand = Plus / Plus
Query: 1 agcgtagtctaatgaatgcttataaaaatcaccattttgtaaacctgcagctgggctgac 60
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 agcgtagtctaat-aatgcttataaaaatcaccattttgtaaacctggagctgggctgac 259
Query: 61 tatggctacagcagtggtaataaaaggccacaaatattccacatactatgttactaatag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 260 tatggctacagcagtggtaataaaaggccacaaatattccatatactatgttactaatag 319
Query: 121 agagaacacgcctgaagttcaacacatattatcaggattccttttcagcatttccaagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agagaacacgcctgaagttcaacacatattatcaggattccttttcagcatttccaagga 379
Query: 181 tggacatgatgtctgagcctaataggcatggaggaatgaaggctttacctctgcaaactg 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 380 tggacatgatgtctgagcctaataggcatgaaggaatgaaggctttacctctgcaaactg 439
Query: 241 aaa------tttttttgacgcttgacactgttttgaaggcgcatcggggtgtgatgtcct 294
||| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 aaacaaggct------gacgcttgacactgttttgaaggcgcatcggggtgcgatgtcct 493
Query: 295 tgaagatatctgaaagggaacaagacatgttcatgtttgaggaaacctttactacactac 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgaagatatctgaaagggaacaagacatgttcatgtttgaggaaacctttactacactac 553
Query: 355 actaatagattctgccacatatttcatgtggattcccaagtaagttgtcactctcaatcc 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 actaatagattctgccacatatttcatgtggattcccaagtaagttgtcactctcaatcc 613
Query: 415 ctcctggaaaaatcaacacaaaatggtaataagagaagacaatggcagtaaagaataaag 474
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||
Sbjct: 614 ctcctggaaaaatcaacacaaaatggtaataacagaagacaatggcagtaaggaacaaag 673
Query: 475 gacagagtctggctcatttgccacaccccttataagaatatcaggcgtgtgatcaaatgg 534
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 674 gacagagtctggctcatttgccacaccccttataagaatatcaggtgtgtgatcaaatgg 733
Query: 535 tact 538
||||
Sbjct: 734 tact 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space: 489456
Effective search space used: 489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_o05.g1 MSMg01no372_o05.g1 CHROMAT_FILE:
MSMg01no372_o05.g1 PHD_FILE: MSMg01no372_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:44 2005
(534 letters)
>mm_chr16_50443367_50444299
Length = 933
Score = 909 bits (470), Expect = 0.0
Identities = 494/504 (98%), Gaps = 5/504 (0%)
Strand = Plus / Minus
Query: 1 actctgtagaccaggctgtcctcgaactcacagagatccacttgcctctgcctccctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actctgtagaccaggctgtcctcgaactcacagagatccacttgcctctgcctccctgag 444
Query: 61 tgctgggattagagatatacaccaccactccccagctacagctatctttgctactgaaac 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgctggggttagagatatacaccaccactccccagctacagctatctttgctactgaaac 384
Query: 121 acaaggtcctttagcacagggactacaactgtttcgtttctcttgtgataatcattgatg 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 383 acaaggtcctttagcacagggactacaactg-ttcgtttctcttgtgataatcatagatg 325
Query: 181 ctggcccgaggaggctcataatagatgatgcatgcatgcatgag----tgaatgaatgaa 236
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 324 ctggcccgaggaggctcataatagatgatgcatgcatgcatgagtgaatgaatgaatgaa 265
Query: 237 tgaatgaatgaccaggaaaacacacttccatgttcatctgggcagcagtctgagctttac 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaatgaatgaccaggaaaacacacttccatgttcatctgggcagcagtctgagctttac 205
Query: 297 tgatcggtaggaagaaaaagactttggtcattgttttcttaggtgatgaccaagatttca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tgatcggtaggaagaaaaagactttggtcattgttttcttaggtgatgaccaagatttca 145
Query: 357 tttcagttcggctcttctctgtgcttcactttgaaaacccaaggtaattccaagctatga 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tttcagttcggctcttctctgtgcttcactttgaaaacccaaggtaattccaagctatga 85
Query: 417 agggcagtatacactgagccttacaactaggaaggcaaaggatggaatggtagtgggcta 476
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 84 agggcagtatacactgagccttacaactaggaaggcaaaagatggaatgatagtgggcta 25
Query: 477 agaaacaaagggaccttttgctac 500
||||||| ||||||||||||||||
Sbjct: 24 agaaacagagggaccttttgctac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 933
Length adjustment: 10
Effective length of query: 524
Effective length of database: 923
Effective search space: 483652
Effective search space used: 483652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
