Query= MSMg01no374_f22.b1 MSMg01no374_f22.b1 CHROMAT_FILE:
MSMg01no374_f22.b1 PHD_FILE: MSMg01no374_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:35 2005
(485 letters)
>mm_chr16_26519297_26520181
Length = 885
Score = 777 bits (402), Expect = 0.0
Identities = 454/476 (95%), Gaps = 12/476 (2%)
Strand = Plus / Minus
Query: 13 gaattcttcaagtgttcc---aactgatgtcctgt--ttgtcatactctggatctcaagt 67
|||||||||||||| | |||||||||||||| | ||||||||||||||||||||
Sbjct: 674 gaattcttcaagtg---caggaactgatgtcctgtcct--tcatactctggatctcaagt 620
Query: 68 gtgaatgatcagaatgaaatgcacagaacctccacaagggggtgcaaagggctcagaagg 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gtgaatgatcagaatgaaatgcacagaacctccacaagggggtgcaaagggctcagaagg 560
Query: 128 agaaaacaaaatgaggtcggatatgtgttaaccctgaaatctgtgttaaatggctcaaca 187
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 559 agaaaacaaaatgaggtcggatatgtgttaatcctgaaatctgtgttaaacggctcaaca 500
Query: 188 gtttcaaaaaacaaacaaaatgaggtactcaatatttgttgttgactttacattatatgg 247
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 499 gtttcaaaaaacaaacaaaatgaggtactcaatatttgtggttgactttacattatatgg 440
Query: 248 accatcgtaaatggaaaaggatactaacagagatttctatttgaagatgaaatactccat 307
||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 439 accattgtaaatggaaaaggatactaactgacatttctatttgaagatgaaatactccat 380
Query: 308 attcttagccaggagcttagaggtcaaggatctaaaacaagagttcctgatttgttcata 367
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 379 attcttagccaggagcttagaggttaaggatctaaaacaagagttcctgatttgttcata 320
Query: 368 gtttaagtagcatactatgtttttgagactgttgcattttagtacttcagaattttatca 427
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtttaagtagaatactatgtttttgagactgttgcattttagtacttcagaattttatca 260
Query: 428 tacaatccccaagactacaaaagtcatatgtgtgtgtgtgtgcgtgt--agataga 481
||||| |||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 259 tacaacccccaagactacaaaagtcatatgtgtgtgtgtgtgtgtgtgtagataga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_f22.g1 MSMg01no374_f22.g1 CHROMAT_FILE:
MSMg01no374_f22.g1 PHD_FILE: MSMg01no374_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:35 2005
(342 letters)
>mm_chr2_72764728_72765469
Length = 742
Score = 549 bits (284), Expect = e-161
Identities = 303/318 (95%), Gaps = 14/318 (4%)
Strand = Plus / Minus
Query: 1 cagaaattcccttgccgtgcaaaaggtgctaagggctagacagggactgctgaaaccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cagaaattcccttgccgtgcaaaaggtgctaagggctagacagggactgctgaaaccaga 259
Query: 61 tcagggtccataggtggattcctgataagtgggagatgctgctgctgataaagaactg-- 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcagggtccataggtggattcctgataagtgggagatgctgctgctgataaagaactggt 199
Query: 119 ------------gtgtgtgtgtgtgtgtgtgtgtgtgtgagggcactctggttgctgagg 166
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagggcactctggttgctgagg 139
Query: 167 caagagttttcatattctaggccagcatggtgtcacagagttcaaggccatcctgggata 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 caagagttttcatattctaggccagcatggtgtcacagagttcaaggccatcctgggata 79
Query: 227 ttagagggatattatatgtgtgtaatactaaaatagtcaggaaagcttgcatgtctattt 286
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 78 ttagagggatattatatgtgtgtaatactaaaatagtcaggaaagtttgcatgtctattt 19
Query: 287 tgtttaatactatttcct 304
||||||||||||||||||
Sbjct: 18 tgtttaatactatttcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
