Query= MSMg01no374_p17.b1 MSMg01no374_p17.b1 CHROMAT_FILE:
MSMg01no374_p17.b1 PHD_FILE: MSMg01no374_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:24 2005
(515 letters)
>mm_chr16_62650345_62651261
Length = 917
Score = 953 bits (493), Expect = 0.0
Identities = 510/517 (98%), Gaps = 2/517 (0%)
Strand = Plus / Plus
Query: 1 tgattatataacactttcctataatttctaattcaggagctagtcacatattctgtanaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 tgattatataacactttcctataatttctaattcaggagctagtcacatattctgtaaaa 260
Query: 61 tctaaatttttagccatagaattttccaaatgcatttagggaanaagaatttttagcaaa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 tctaaatttttagccatagaattttccaaatgcatttagggaaaaagaatttttagcaaa 320
Query: 121 acacttggtttaagtttttttt--cttagtttaacttattaatgagtatgtaccttgaaa 178
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacttggtttaagttttttttttcttagtttaacttattaatgagtatgtaccttgaaa 380
Query: 179 cataaatggcaaaaggaaagaacgcaaggcgagagctatgaaggcgatggcatacacggg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cataaatggcaaaaggaaagaacgcaaggcgagagctatgaaggcgatggcatacacggg 440
Query: 239 gaatgtgctcataagaactatagtgacaacttctgatgcataatcgcatcccacacaccc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatgtgctcataagaactatagtgacaacttctgatgcataatcgcatcccacacaccc 500
Query: 299 atatgaaaggcatatcgtgagtaaaaggctcagctgtcaattacaacgcctgttctcacg 358
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 501 atatgaaaggcatatcgtgagtaaaaggctcagctgtcaattacaatgtctgttctcacg 560
Query: 359 ctgagtgttaatgaaactggagcagaaggagaacactcatggattttatcagcagaacag 418
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 ctgagtgttaatgaaactggagcagaaggagaacacacatggattttatcagcagaacag 620
Query: 419 ggtaccccagttcttccaacttttcagatttcttgtgttgattacactgccagacacttt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtaccccagttcttccaacttttcagatttcttgtgttgattacactgccagacacttt 680
Query: 479 tcatgctggaacttagtcataaagttatcattttcaa 515
|||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatgctggaacttagtcataaagttatcattttcaa 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 917
Length adjustment: 10
Effective length of query: 505
Effective length of database: 907
Effective search space: 458035
Effective search space used: 458035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_p17.g1 MSMg01no374_p17.g1 CHROMAT_FILE:
MSMg01no374_p17.g1 PHD_FILE: MSMg01no374_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:25 2005
(506 letters)
>mm_chr16_62816308_62817213
Length = 906
Score = 729 bits (377), Expect = 0.0
Identities = 389/393 (98%), Gaps = 1/393 (0%)
Strand = Plus / Minus
Query: 114 tcatttctagaactgctactttgtgctatttttaaattgatttttgtttgtttgtttgtt 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 tcatttctagaactgctactttgtgctatttttaaattgatttttgtttgtttgtttgtt 847
Query: 174 tatttgagacccaatttctctgtttaccattgatttctggcaccaactctgtagacctgg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 tatttgagacccaatttctctgtttaccattgatttctggcaccaactctgtagacctgg 787
Query: 234 caggccatggactccaagatccaactgcctctgcccccacgcccctagtgctgggattaa 293
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 786 caggccatggact-caagatccaactgcctctggccccacgcccctagtgctgggattaa 728
Query: 294 aggcattcgccaccaactgccataaattgatagtttcaacttgaaggacatagcaaacgt 353
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 727 aggcattcgccaccaactgccataaattgatagtttcaacttgaaggatatagcaaacgt 668
Query: 354 ttctctatatttcagacagaaggaagcagttctaagatggctgtctcccttgatgaggca 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttctctatatttcagacagaaggaagcagttctaagatggctgtctcccttgatgaggca 608
Query: 414 taggtgatgaccttggcagtggtagcacactcagcattctgttccagtccttgtgtgtct 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 taggtgatgaccttggcagtggtagcacactcagcattctgttccagtccttgtgtgtct 548
Query: 474 gtgtaaaactcacttagtgtatgtgctcgggtg 506
| |||||||||||||||||||||||||||||||
Sbjct: 547 gagtaaaactcacttagtgtatgtgctcgggtg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
