Query= MSMg01no375_c05.b1 MSMg01no375_c05.b1 CHROMAT_FILE:
MSMg01no375_c05.b1 PHD_FILE: MSMg01no375_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:38 2005
(514 letters)
>mm_chr16_51957702_51958615
Length = 914
Score = 888 bits (459), Expect = 0.0
Identities = 499/513 (97%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctaacaatctacaagatgtgtatctaaaactttaaatagttggaaaaatgaga 63
||||||| |||||| ||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttaacaaactagaagatgtatatctaaaactttaaatagttggaaaaatgaga 263
Query: 64 atcataacagcaaaaactttagaaagttgatccaagaaataaaaagacctgctcagttca 123
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 264 atcataacagcaaaaactttagaaagctgatccaagaaataaaaagacctgctcagttca 323
Query: 124 cataatttatagaatattggggaacaggtagcatcttaaattaagttgaagtaagaattt 183
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 324 cataatttatagactattggggaacaggtagcattttaaattaagttgaagtaagaattt 383
Query: 184 ttcaaggactatgtagtagaggtaggcttctgatggctatagacatcaaggcctatgaaa 243
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 384 ttcaaggactatgtagtagaggtaggcttctgatggctgtagacatcaagacctatgaaa 443
Query: 244 tagagttagttttcctgtaagaaaatgctgtgtataagacaggtaaggtctatagacaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagagttagttttcctgtaagaaaatgctgtgtataagacaggtaaggtctatagacaag 503
Query: 304 acatgcatttcagagtacttatatgttatctcctgagaactaaagaaccatgttcttcaa 363
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 504 acatgcatttcagagtatttatatgttatcttctgagaactaaagaaccatgttcttcaa 563
Query: 364 gaatacatatgaacatgtcctctggcactttaaggcttcccatcccttcttcttcgggta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaatacatatgaacatgtcctctggcactttaaggcttcccatcccttcttcttcgggta 623
Query: 424 taagggttgctttgtaaatgttgtagattgtaagatccagaagaccaggatatcagctgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taagggttgctttgtaaatgttgtagattgtaagatccagaagaccaggatatcagctgt 683
Query: 484 aagttaa--tcttctagaaatatgagagatgct 514
||||||| ||||||||| ||||||||||||||
Sbjct: 684 aagttaacttcttctagacatatgagagatgct 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_c05.g1 MSMg01no375_c05.g1 CHROMAT_FILE:
MSMg01no375_c05.g1 PHD_FILE: MSMg01no375_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:38 2005
(358 letters)
>mm_chr16_52114746_52115503
Length = 758
Score = 609 bits (315), Expect = e-179
Identities = 350/367 (95%), Gaps = 9/367 (2%)
Strand = Plus / Minus
Query: 1 tttaagatgagaatcaagtaagtctgaagaatttggggcagaagaaagagaaagaactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tttaagatgagaatcaagtaagtctgaagaatttggggcagaagaaagagaaagaactca 671
Query: 61 accagtgggaaggtagactagtcagcactgttcacgaagtcaaaaagcacaaggacgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 670 accagtgggaaggtagactagtcagcactgttcacgaagtcaaaaagcacagggacgaca 611
Query: 121 gaaaaaccaacagtgaagagcgcttctccaaacatctcccaaa---------cattttag 171
||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 610 gaaaaaccaacagtgaagagcgcttctccaaacatctcccaaaggtgttgctcattttag 551
Query: 172 aactctagttatacatttctgtatacgttctggcagtagcctggaactgaatgttcatcc 231
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 550 aactctagttatacatttctgtatacattctggcagtagcctggaactgaatgttcatcc 491
Query: 232 taaaagtaacaaaacgttaaaggcaatttacagccttcctcagtctgtacactcagcagg 291
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 490 taaaagtaacaaaacgttaaaggcaatttacagccttcctcagtctgtagactcagcaag 431
Query: 292 cggtgggagggctgaggaggtagggagagtacttggtctgcaggttaagtgacttcctga 351
||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||
Sbjct: 430 cggtgggagggctgaggaggtagggggagtacttgacctgtaggttaagtgacttcctga 371
Query: 352 cataaca 358
|||||||
Sbjct: 370 cataaca 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
