NNNTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCACCTGTACCATACCGAATGGCAGAGAAGCACCTGAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
AAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGT
TGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTT
CCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCC
TGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCC
ACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGAACC
CAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACA
CAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTA
GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTC
CCAAATGGACCGCACACCATATGTACTCACTGATAAGTGGAAATTAGCCC
CAAAACCTTATGATACTCCAGCATATAAGAACCTATTTCCTTTACCCATG
CAATCTCACTAATAAATGGTGACCGCCCCGTGGTACACCATGTCCCCTCC
TTTTTAG

NNNNAACGATGATAGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTTACACATTCACTGTC
AGACTCTTACACATGCACAAACACAGACAATCATGCAAACACACACAGAA
GAAAGAGAGAGAGACAGAGAGAGAGAGAGAGAGAGATGCTTTAAAGACTC
TAAAGCAACATGTTAGTGTCAACGGTTTTCATTTTGGTTATTGAGCTCTA
AATCTATTTAAGATACCTGATTCATACATTATTCATGAAATAAAATTATA
GCTATAAAACAATTTTAAAAATTCTTACCTTGAATTATTTGAATAACAAA
ATATCTAACAAAATTGCAAAGGTTACCAGTTACAGTGTCTTTTATTTCTT
TTTCCTCATATTACTTCTGATTTTCTTTCATCATTTCTACTTTTAAATTT
TACCTGCTAATTAAATGGGAAAATTGTAACACTTGAGTTTTATAATTTAA
AAATTGAAATATTCTATAACAAGGGGAACACATGATATATAAATACTGAT
TTAGTAATTATACTCTAAATTTACATTTGAAAGTAAATAGTTTTATAGTC
ATACAGAAACAATTAAAATATTAACCTCTTTAAAAACTACAAATTGAAAT
ATGTAGAACCAAAGGAAGAGATATAAGAACTATGTACTAAATTTCCTTTT
TTTAAACTTGTTTTGTTTACCAACTCAGGACATCTCATGCCTGTGAGAGG
CC

Query= MSMg01no375_p07.g1 MSMg01no375_p07.g1 CHROMAT_FILE:
MSMg01no375_p07.g1 PHD_FILE: MSMg01no375_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:43 2005
         (554 letters)



>mm_chr16_54178803_54179756
          Length = 954

 Score = 1021 bits (528), Expect = 0.0
 Identities = 544/554 (98%), Gaps = 8/554 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tccttacacattcactgtcagactcttacacatgcacaaacacagacaatcatgcaaaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tccttacacattcactgtcagactcttacacatgcacaaacacagacaatcatgcaaaca 792

                                                                       
Query: 61  cacacagaagaaagagagagagacagagagagagagagagagagatgctttaaagactct 120
           ||||||||||||||||        ||||||||||||||||||||||||||||||||||||
Sbjct: 791 cacacagaagaaagag--------agagagagagagagagagagatgctttaaagactct 740

                                                                       
Query: 121 aaagcaacatgttagtgtcaacggttttcattttggttattgagctctaaatctatttaa 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 739 aaagcaacatgttagtgtcaacggttttcattttgggtattgagctctaaatctatttaa 680

                                                                       
Query: 181 gatacctgattcatacattattcatgaaataaaattatagctataaaacaattttaaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gatacctgattcatacattattcatgaaataaaattatagctataaaacaattttaaaaa 620

                                                                       
Query: 241 ttcttaccttgaattatttgaataacaaaatatctaacaaaattgcaaaggttaccagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttcttaccttgaattatttgaataacaaaatatctaacaaaattgcaaaggttaccagtt 560

                                                                       
Query: 301 acagtgtcttttatttctttttcctcatattacttctgattttctttcatcatttctact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acagtgtcttttatttctttttcctcatattacttctgattttctttcatcatttctact 500

                                                                       
Query: 361 tttaaattttacctgctaattaaatgggaaaattgtaacacttgagttttataatttaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttaaattttacctgctaattaaatgggaaaattgtaacacttgagttttataatttaaa 440

                                                                       
Query: 421 aattgaaatattctataacaaggggaacacatgatatataaatactgatttagtaattat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aattgaaatattctataacaaggggaacacatgatatataaatactgatttagtaattat 380

                                                                       
Query: 481 actctaaatttacatttgaaagtaaatagttttatagtcatacagaaacaattaaaatat 540
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 379 actctaaatttacatttgaaagtaaatagttttatagttatacagaaacaattaaaatat 320

                         
Query: 541 taacctctttaaaa 554
           ||||||||||||||
Sbjct: 319 taacctctttaaaa 306


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space:   513536
Effective search space used:   513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)