Query= MSMg01no376_f16.b1 MSMg01no376_f16.b1 CHROMAT_FILE:
MSMg01no376_f16.b1 PHD_FILE: MSMg01no376_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:14 2005
(380 letters)
>mm_chr16_91107821_91108600
Length = 780
Score = 638 bits (330), Expect = 0.0
Identities = 370/392 (94%), Gaps = 17/392 (4%)
Strand = Plus / Plus
Query: 5 gaattccatgaataataatgaggacgcaaactgtcaagcagagagcctgcctaatcacgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 gaattccatgaataataatgaggacgcaaactgtcaagcagagagcctgcctaatcacgc 247
Query: 65 ggaaatcttgcactgtcacagcccctccccttcccataaagctgcttcagctccatcctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ggaaatcttgcactgtcacagcccctccccttcccataaagctgcttcagctccatcctt 307
Query: 125 gcatcagcatcacttaaccatctccccccc---ccccccccccc-ggcttcgcgaggccc 180
|||||||||||||||||||||||||||||| ||||||||||| | ||||||||| |||
Sbjct: 308 gcatcagcatcacttaaccatctccccccccctccccccccccctgccttcgcgagtccc 367
Query: 181 ctccccac------------agg-ccctccccacaggccctccctgaggctcctcccaga 227
|||||||| ||| |||||||||||| |||||||||||||||||||||||
Sbjct: 368 ctccccacaacccctccccgaggcccctccccacagcccctccctgaggctcctcccaga 427
Query: 228 gttggctggcacactggcctttccagttctcctctggaatggcaagcagcttccgacagg 287
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 428 gttggctgtcacactggcctttccagttctcctctggaatgtcaagcagcttccgacagg 487
Query: 288 atgaaagttaaagtaagtctcctacctacagacacccactccaagagactggagtccctc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 atgaaagttaaagtaagtctcctacctacagacacccactccaagagactggagtccctc 547
Query: 348 ctccctccagtccttcccaaacagctccaact 379
||||||||||||||||||||||||||||||||
Sbjct: 548 ctccctccagtccttcccaaacagctccaact 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_f16.g1 MSMg01no376_f16.g1 CHROMAT_FILE:
MSMg01no376_f16.g1 PHD_FILE: MSMg01no376_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:14 2005
(457 letters)
>mm_chr16_91287618_91288474
Length = 857
Score = 681 bits (352), Expect = 0.0
Identities = 364/368 (98%)
Strand = Plus / Minus
Query: 90 agtgtttctcaacctgtgggttgggaccccctctgcaggggttgcagaagatcatttgaa 149
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 857 agtgtttctcaacctgtgggttgggaccccctctgcaggggttgcagaagatcgtctgaa 798
Query: 150 aacacagatatttacaattcataacagtagcaaaattacatttacaaagtagcaacgaaa 209
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 797 aacacagatatttacaattcataacagtagcaaaattacagttacaaagtagcaacgaaa 738
Query: 210 ataattttatggttggatgtcaccacaacataaagaactgtattaaacggtcgaagcagt 269
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ataattttatggttgggtgtcaccacaacataaagaactgtattaaacggtcgaagcagt 678
Query: 270 tggaaggctgagaaccgctgtggtagagtgtcttagccgtatgtctttaaaattgaacat 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tggaaggctgagaaccgctgtggtagagtgtcttagccgtatgtctttaaaattgaacat 618
Query: 330 tcatgaattcattgatcctcacagtcacagtcattctcaaggatagagcctctgttgtgt 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcatgaattcattgatcctcacagtcacagtcattctcaaggatagagcctctgttgtgt 558
Query: 390 ggttttagaactctatttaagccggaactaaaccccaaatagaacctatttgggagtaat 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggttttagaactctatttaagccggaactaaaccccaaatagaacctatttgggagtaat 498
Query: 450 aaactaca 457
||||||||
Sbjct: 497 aaactaca 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
