Query= MSMg01no376_o16.b1 MSMg01no376_o16.b1 CHROMAT_FILE:
MSMg01no376_o16.b1 PHD_FILE: MSMg01no376_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:56 2005
(532 letters)
>mm_chr16_8967241_8968170
Length = 930
Score = 924 bits (478), Expect = 0.0
Identities = 515/528 (97%), Gaps = 2/528 (0%)
Strand = Plus / Minus
Query: 5 gaattctgatcctcctgcctccacttccgtatgctgggattgtaggatgcaacctgatgc 64
||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||
Sbjct: 873 gaattctgatcctcctgcctccacttctgtatactgggattgtagaatgcaacctgatgc 814
Query: 65 acatcttagaagtgctaagaatagaacccagtccttcatagatgggaggcgagcattcct 124
|||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||
Sbjct: 813 acatcttagaagtgctaagaatagaacccaatccttcatagacgggaggcaagcattcct 754
Query: 125 gcctaagctagatccccattccctcaaattaatttttttttgcttaaataaataacattt 184
||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 753 gcccaagctagatccccattccctcaaattgatttttttt--cttaaataaataacattt 696
Query: 185 gcaacaaaatttttcatcccagttaatagatagatgatagatataagtaacctgctataa 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 695 gcaacaaaatttttcatcccagttaatagatagatgatagatataagtatcctgctataa 636
Query: 245 aaataaatacatgaacacccagacactaagatacctcgagtttttgttgtctgctttaaa 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaataaatacataaacacccagacactaagatacctcgagtttttgttgtctgctttaaa 576
Query: 305 tgaaaatcagtaataatcaaacacatagagcaccaagttgggatggtggctttgcatcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 575 tgaaaatcagtaataatcaaacacatagagcaccaagttgggatggtggctttgcgtcat 516
Query: 365 caggggaccaaggggaaacagaaggtggctgatctactgcagctttcaaagggcctggtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 caggggaccaaggggaaacagaaggtggctgatctactgcagctttcaaagggcctggtg 456
Query: 425 ttggctttatgggctgcagacagtgagtgcttttctgtgcccacagcagcacacatcctc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttggctttatgggctgcagacagtgagtgcttttctgtgcccacagcagcacacatcctc 396
Query: 485 cacttgaggaaacactggattttgacttactgtttgcatttttcccat 532
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cacttgaggaaacactggattttgacttactgtttgcatttttcccat 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 930
Length adjustment: 10
Effective length of query: 522
Effective length of database: 920
Effective search space: 480240
Effective search space used: 480240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_o16.g1 MSMg01no376_o16.g1 CHROMAT_FILE:
MSMg01no376_o16.g1 PHD_FILE: MSMg01no376_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:56 2005
(450 letters)
>mm_chr16_8751515_8752364
Length = 850
Score = 847 bits (438), Expect = 0.0
Identities = 447/450 (99%)
Strand = Plus / Plus
Query: 1 acagccacatgcaactcattcccctagggttggacacccctacctgtgattactggtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagccacatgcaactcattcccctagggttggacacccctacctgtgattactggtttt 260
Query: 61 gtttgtttttgagataaggtctcactatgtagtcctggctggcctggcactcctggtgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgtttttgagataaggtctcactatgtagtcctggctggcctggcactcctggtgta 320
Query: 121 gaacaggagaggctagaattcagagatccgagagattatgctaccgtagcctggggccag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 gaacaggagaggctagaattcagagatccgagagattatgctaccttagcctggggccag 380
Query: 181 gggcttagctcagtggtataaagcttgcctagcaggagcgagaccctggctgagttccat 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 gggcttagctcagtggtataaagcttgcctagcaggagcgagatcctggctgagttccat 440
Query: 241 cctctgcaccaaaaggatgaaacaagagagcattagagttagcaaagagcctgatacatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctctgcaccaaaaggatgaaacaagagagcattagagttagcaaagagcctgatacatg 500
Query: 301 tctgtgatcccagtactcagaaggcaggaagactgcaagttccagaccagtcttggccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtgatcccagtactcagaaggcaggaagactgcaagttccagaccagtcttggccac 560
Query: 361 acagtaagaccatggtatccctgcagtacagcatctgcctagcatatgataagacaaagt 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 acagtaagaccatggtatccctgcagtacagcatctgcctagcacatgataagacaaagt 620
Query: 421 gaaagatcacatattgcatgactgaaatcg 450
||||||||||||||||||||||||||||||
Sbjct: 621 gaaagatcacatattgcatgactgaaatcg 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
