Query= MSMg01no377_l24.b1 MSMg01no377_l24.b1 CHROMAT_FILE:
MSMg01no377_l24.b1 PHD_FILE: MSMg01no377_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:02 2005
(380 letters)
>mm_chr16_4882499_4883278
Length = 780
Score = 719 bits (372), Expect = 0.0
Identities = 375/376 (99%)
Strand = Plus / Plus
Query: 5 gaattcagagcacttttgcatgtgcgtgcgtgtgttaaaacattcatgtagcatatatac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagcacttttgcatgtgcgtgcgtgtgttaaaacattcatgtagcatatatac 264
Query: 65 catgaaatatgcataagagtgttaggatttcacagggagaacttttcttttttgattttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catgaaatatgcataagagtgttaggatttcacagggagaacttttcttttttgattttt 324
Query: 125 aaagactataccaggttcagatatcttcagctcattgatcaaagagttcaacatatttaa 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 aaagactataccaggttcagatatctttagctcattgatcaaagagttcaacatatttaa 384
Query: 185 ggtaggaaaagtttttcccacctcacagttacagggtaccgtctgctgtggcagagtagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtaggaaaagtttttcccacctcacagttacagggtaccgtctgctgtggcagagtagt 444
Query: 245 caaggtggtgggagctgaagcagctagtcacatggcatccaaaatcaggaaaataggatc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaggtggtgggagctgaagcagctagtcacatggcatccaaaatcaggaaaataggatc 504
Query: 305 aacgctccaacttattttatattttgttttatatttatttactgtgtgtttatgtgggtg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacgctccaacttattttatattttgttttatatttatttactgtgtgtttatgtgggtg 564
Query: 365 tgtgaatgctatggtg 380
||||||||||||||||
Sbjct: 565 tgtgaatgctatggtg 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_l24.g1 MSMg01no377_l24.g1 CHROMAT_FILE:
MSMg01no377_l24.g1 PHD_FILE: MSMg01no377_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:03 2005
(380 letters)
>mm_chr16_5027578_5028357
Length = 780
Score = 586 bits (303), Expect = e-172
Identities = 309/311 (99%)
Strand = Plus / Minus
Query: 1 tgcagagagctgagagacaacccaaatagaaaacaaaaacaggtggaatttctgatagaa 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 311 tgcagagagctgagagacaacccaaatagaaaacaaaaaaaggtggaatttctgatagaa 252
Query: 61 aaaagagataaagatatgtaagaaccaattgggtggaatgcttcactctggtcctcacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aaaagagataaagatatgtaagaaccaattgggtggaatgcttcactctggtcctcacac 192
Query: 121 tcagaagcctgacacaggaacattgctgttaagttgaggtcactgattacatagctggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tcagaagcctgacacaggaacattgctgttaagttgaggtcactgattacatagctggcc 132
Query: 181 agactgagctacaaggtgaggctgtatctcagttcttaaaacaaggcccagaaagattga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 agactgagctacaaggtgaggctgtatctcagttcttaaaacaaggcccagaaagattga 72
Query: 241 gtttgaagtcaatcttcagtaaagcacataagtgaggatctaaattcagttcccagtacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 71 gtttgaagtcaatcttcagtaaagcacataagtgaggatctaaattcagttcccagttcc 12
Query: 301 cacatgaaaca 311
|||||||||||
Sbjct: 11 cacatgaaaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
