Query= MSMg01no379_f12.b1 MSMg01no379_f12.b1 CHROMAT_FILE:
MSMg01no379_f12.b1 PHD_FILE: MSMg01no379_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:05 2005
(572 letters)
>mm_chr16_56084661_56085631
Length = 971
Score = 882 bits (456), Expect = 0.0
Identities = 527/570 (92%), Gaps = 33/570 (5%)
Strand = Plus / Plus
Query: 4 ggaattctctatgttcactaggctggcctcaaattcacagagacagcctctgcctcccaa 63
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ggaattctctatgtagattaggctggcctcaaattcacagagacagcctctgcctcccaa 293
Query: 64 atgctaggattaaatttatttgacaccgcacctgatggaggagggtttcctgtgtccgca 123
||||||||||||||||||||||||| |||||
Sbjct: 294 atgctaggattaaatttatttgaca------------------------------ccgca 323
Query: 124 cctgatggaggagggtttcctgtgtccagaagtttgaggctagcctaggaaatatatcca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctgatggaggagggtttcctgtgtccagaagtttgaggctagcctaggaaatatatcca 383
Query: 184 taatactaagttaatacatcattgtcagattctcttccctgagttctcctgcccgttcct 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 384 taatactaagttaatacatcattgtcagattctcttccctgagttc-cctgcctgttcct 442
Query: 244 cctttaccctttctcagttttcacagtgttgattatggaacccagggctttgaaaatgtt 303
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 443 cctttaccctttctcggttttcacagtgttgaggatggaacccagggctttgaaaatgct 502
Query: 304 gaggatatactttgccaccaaagccacaccccctttccatactctttaggatgacatttt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaggatatactttgccaccaaagccacaccccctttccatactctttaggatgacatttt 562
Query: 364 tattttcaaataacttgtgactcagaaaagttatagaaataggacagaattcctgtgtac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tattttcaaataacttgtgactcagaaaagttatagaaataggacagaattcctgtgtac 622
Query: 424 tatttgttcagtttattctgatgttaatatcttatataatgagagtatgaatgtcaaaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tatttgttcagtttattctgatgttaatatcttatataatgagagtatgaatgtcaaaaa 682
Query: 484 atgagaaattagccttgatctgatactttaacctatagatccattccaagattcttcatt 543
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ataagaaattagccttgatctgatactttaacctatagatccattccaagattcttcatt 742
Query: 544 tcctttacttggtatac-tttttaagtttc 572
||||||||||| ||||| ||||||| ||||
Sbjct: 743 tcctttacttgttatacctttttaa-tttc 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 971
Length adjustment: 10
Effective length of query: 562
Effective length of database: 961
Effective search space: 540082
Effective search space used: 540082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_f12.g1 MSMg01no379_f12.g1 CHROMAT_FILE:
MSMg01no379_f12.g1 PHD_FILE: MSMg01no379_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:05 2005
(341 letters)
>mm_chr16_56262272_56263014
Length = 743
Score = 590 bits (305), Expect = e-173
Identities = 333/343 (97%), Gaps = 2/343 (0%)
Strand = Plus / Minus
Query: 1 agtattaatataagtttggtgactagttgaaagttagggtgatggaaac--tggaattaa 58
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 543 agtattaatataagtttggtgactagttgaaagttagggtgatggaaactatggaattaa 484
Query: 59 gagtgactttccagtttctctaggtgttggtcctaagcagctgaagagataaatagtcca 118
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 483 gagtgactttccagtttctctaggtgttggtcctaagcagctggagagataaatagtcca 424
Query: 119 ttgtttgagaaggagaagcacaggttaaatagagagagaagatgcataaaagaagagttc 178
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 423 ttgtttgagaaggagaagcacaggttaaatagagagagaagatgcacaaaagaagagttc 364
Query: 179 actcttaaatatgttcaatgcaatacacacggaatacatcaaattcagtcaagcagggat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 actcttaaatatgttcaatgcaatacacacggaatacatcaaattcagtcaagcagggat 304
Query: 239 tgtcaggttttttaataatacatctggtacttaaaaggaagcttcctcagtgtagaaaaa 298
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgtcaggcaattaaataatacatctggtacttaaaaggaagcttcctcagtgtagaaaaa 244
Query: 299 tactgaaagtgaaacatgtcctgatggtatgacgctcgggtct 341
|||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 243 tactgaaagtgaaacatgccctcatggtatgacgctcgggtct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 743
Length adjustment: 9
Effective length of query: 332
Effective length of database: 734
Effective search space: 243688
Effective search space used: 243688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
