Query= MSMg01no379_j17.b1 MSMg01no379_j17.b1 CHROMAT_FILE:
MSMg01no379_j17.b1 PHD_FILE: MSMg01no379_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:25 2005
(528 letters)
>mm_chr16_74257041_74257968
Length = 928
Score = 978 bits (506), Expect = 0.0
Identities = 521/526 (99%), Gaps = 2/526 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagtagctttcgttactttacaatttttctttcaaatacagtgtacaacaaatt 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtagccttagttactttacaatttttctttcaaatacagtgtacaacaaatt 263
Query: 64 gtgttattttaaaagggacatttatctttattcttaggcagatttgttggagaatgaagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtgttattttaaaagggacatttatctttattcttaggcagatttgttggagaatgaagc 323
Query: 124 aactcaatataattcagaatgaagagaaggaaaaatttaaaaattgtgttaatatattta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aactcaatataattcagaatgaagagaaggaaaaatttaaaaattgtgttaatatattta 383
Query: 184 ctgtgttgtggttttatatatgatcattatgctagtttctattttcttttttgaactact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctgtgttgtggttttatatatgatcattatgctagtttctattttcttttttgaactact 443
Query: 244 tgctaacaaaaatgaacatcaaaaagagacatgtctt-catttatgcttttagaaggaaa 302
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 444 tgctaacaaaaatgaacatcaaaaagagacatg-ctttcatttatgcttttagaaggaaa 502
Query: 303 acactagtaataacgaaagtatccctctccctacctgaagatagctgaacagaatttaga 362
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 503 acactagtaataacgaaagtatccctctccctacctgaagatagctaaacagaatttaga 562
Query: 363 ttgaaacccatagatatgatgtatacagagaagaaccatttattcacaaatcaaaagtaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttgaaacccatagatatgatgtatacagagaagaaccatttattcacaaatcaaaagtaa 622
Query: 423 attaaagttataaaagagtcatgtacctttgatctaattatactgaaataaacaggaaat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 attaaagttataaaagagtcatgtacctttgatctaattatactgaaataaacaggaaat 682
Query: 483 caaaattagaaggagtttcttcactatccctttctcatacattggc 528
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 caaaattagaaggagtttcttcactatccctttctcatacattggc 728
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_j17.g1 MSMg01no379_j17.g1 CHROMAT_FILE:
MSMg01no379_j17.g1 PHD_FILE: MSMg01no379_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:25 2005
(467 letters)
>mm_chr16_74427592_74428459
Length = 868
Score = 859 bits (444), Expect = 0.0
Identities = 462/468 (98%), Gaps = 1/468 (0%)
Strand = Plus / Minus
Query: 1 acaccatattgcagggggaatacatgttttggggtacagggacccccaaaagagatggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acaccatattgcagggggaatacatgttttggggtacagggacccccaaaagagatggca 609
Query: 61 ttggaacatagagcaataaccaaacatgtaccttctttctacacttttttgcctgttgga 120
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 608 ttggaacatagagcaataaccaaacgtttaccttctttctacacttttttgcctgttgga 549
Query: 121 gggtgtgtttctttctttttcatcttggacaattgtctgttctttggaggtaaattattt 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 548 gggtgtgtttctttctttttcatcttggacaatagtctgttctttggaggtaaattattt 489
Query: 181 tactgaatcttctgt-aaaaaaagcatgaaactaggagacagcatggtgacccttcatgt 239
|| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 488 tagtgaatcttctgtaaaaaaaagcatgaaactaggagacagcatggtaacccttcatgt 429
Query: 240 gctgtagttacatccaaaggaaacagccataaacttcaagcacaaatgttttagtgacat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gctgtagttacatccaaaggaaacagccataaacttcaagcacaaatgttttagtgacat 369
Query: 300 taaaaagctacctctttcaatttttgttgtgtcacatgtggtgtcctttgcttcctgaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 taaaaagctacctctttcaatttttgttgtgtcacatgtggtgtcctttgcttcctgaga 309
Query: 360 cttagttgttattttggacatcttgtttcctaataagtatttaagtctgccatcagatct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 cttagttgttattttggacatcttgtttcctaataagtatttaagtctgccatcagatct 249
Query: 420 taccctcttataaaattgtctccttttataagatttccacgttgcctg 467
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 taccctcttataaaattgtctccttttataagatttccacgttgcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 868
Length adjustment: 10
Effective length of query: 457
Effective length of database: 858
Effective search space: 392106
Effective search space used: 392106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
