Query= MSMg01no379_m03.b1 MSMg01no379_m03.b1 CHROMAT_FILE:
MSMg01no379_m03.b1 PHD_FILE: MSMg01no379_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:36 2005
(109 letters)
>mm_chr16_3114624_3115131
Length = 508
Score = 118 bits (61), Expect = 1e-31
Identities = 97/109 (88%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 1 ataagaaatagaaataaaaaagaattagaaaaaagattacagaaataaaacataagccca 60
|||| ||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 201 ataa-aaatataaatgaaaaagaattagaaaaaagattacagaaatcaaacataagctca 259
Query: 61 ctagattgcaggttaccgcaatcacagcagaaatatcaaacacacacac 109
|| | ||||| |||||| ||||||||| |||||||| | ||||||||||
Sbjct: 260 cttggttgcaagttaccacaatcacagtagaaatattacacacacacac 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 508
Length adjustment: 8
Effective length of query: 101
Effective length of database: 500
Effective search space: 50500
Effective search space used: 50500
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no379_m03.g1 MSMg01no379_m03.g1 CHROMAT_FILE:
MSMg01no379_m03.g1 PHD_FILE: MSMg01no379_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:36 2005
(342 letters)
>mm_chr18_40467476_40468216
Length = 741
Score = 366 bits (189), Expect = e-105
Identities = 231/245 (94%), Gaps = 1/245 (0%)
Strand = Plus / Minus
Query: 1 tctgaactcactgtcctttcaggtccacatttgctctggctctggcaactgactgaacca 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 tctgaactcactgtcctttcaggtccacctttgctctggctctggcaactgactgaacca 385
Query: 61 aacaattaggctcatacctagaactttggaaatggtaatggagttgataacacaccctaa 120
||||| |||||||||||||||| ||| | |||||||||||||||||| ||||||| ||||
Sbjct: 384 aacaa-taggctcatacctagatcttcgaaaatggtaatggagttgaaaacacactctaa 326
Query: 121 cagaaagaggaatgctccactcactagtacactttcactagaagcctcaccctgtcagca 180
|||||||||||| |||||||||||||| | |||||||||||||||||| ||||| |||||
Sbjct: 325 cagaaagaggaaggctccactcactagaagactttcactagaagcctcgccctgccagca 266
Query: 181 gtttaggaatttgtaaagccaatctggacaatatttaaatggtttggaatttctacttca 240
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 265 gtttaggaatttgtaaagccaatctggacaatatttacatgatttggaatttctacttca 206
Query: 241 tgttt 245
|||||
Sbjct: 205 tgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 741
Length adjustment: 9
Effective length of query: 333
Effective length of database: 732
Effective search space: 243756
Effective search space used: 243756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
