Query= MSMg01no380_k21.b1 MSMg01no380_k21.b1 CHROMAT_FILE:
MSMg01no380_k21.b1 PHD_FILE: MSMg01no380_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:49 2005
(650 letters)
>mm_chr16_70696305_70697354
Length = 1050
Score = 1181 bits (611), Expect = 0.0
Identities = 641/651 (98%), Gaps = 1/651 (0%)
Strand = Plus / Plus
Query: 1 ggttttcacacctgcatgaaagtgtttccaccctcagagccatggtcatgaagttttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggttttcacacctgcatgaaagtgtttccaccctcagagccatggtcatgaagttttaat 260
Query: 61 gtcaggttattattacaggagtgtgcaatgttccgacatcctcaggtctgaacactaggc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gtcaggttattattacaggagtgtgcaatgttccgacatcctcagatctgaacactaggc 320
Query: 121 tctcagctgccaaaattgttttgggtgtttgtaagccttttagacatggggttcatctga 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctcagctgccaacattgttttgggtgtttgtaagccttttagacatggggttcatctga 380
Query: 181 tagacttaggattataaaagtagagcttgatgatttatagcagctcttgtcctcatggga 240
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 381 tagacttaggattataaaagtagagcttgaggatttatagcagctctcgtcctcatggga 440
Query: 241 gctctgcttcctggctatagatgtaacccactgcattagcatcccacttttatatctgtg 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 gctctgcttcctggctatagatgtaacccactgcatcagcatcccacttttatatctgtg 500
Query: 301 agccacaccttccaccaatctttattctgcaacatacattctagttctcaaaaccttagg 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 agccacaccttccaccaatctttattctgcaacatacactctagttctcaaaaccttagg 560
Query: 361 cagaataagccatttctttcagaggctacattctcaggtattgtattagaaaaaaattac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaataagccatttctttcagaggctacattctcaggtattgtattagaaaaaaattac 620
Query: 421 aaccaatataggagtctataaaacttttctttctctttcactacttcaggagatttttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaccaatataggagtctataaaacttttctttctctttcactacttcaggagatttttct 680
Query: 481 gattttatagcttttttc-ccatttagccccaaataacatattggtattctgtagctact 539
||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 gattttatagcttttttttccatttagccccaaataacatattggtattccgtagctact 740
Query: 540 aaataataaatagtctagctatattttgataaacaaatgttgtatcctcatcaattcata 599
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaacaataaatagtctagctatattttgataaacaaatgttgtatcctcatcaattcata 800
Query: 600 tgcaatatttattttagaaacatgaattaacacttagctaaagtacagcag 650
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgcaatatttattttagaaacatgaattaacacttagctaaagtacagcag 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_k21.g1 MSMg01no380_k21.g1 CHROMAT_FILE:
MSMg01no380_k21.g1 PHD_FILE: MSMg01no380_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:49 2005
(486 letters)
>mm_chr16_70863972_70864857
Length = 886
Score = 878 bits (454), Expect = 0.0
Identities = 478/486 (98%)
Strand = Plus / Minus
Query: 1 ctgtcctgacttccattggtgatgaacagcattgtggaagtgtaagctgaataaaccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ctgtcctgacttccattggtgatgaacagcattgtggaagtgtaagctgaataaaccctt 750
Query: 61 tcctcccaaatttgcttcttggtcttgatgttttgtgcagggatacaaaccctgactaag 120
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 749 tccccccaaatttgcttcttggtcttgatgttttgtgcagggatacaaaccctgactatg 690
Query: 121 gcagaagctaataaattaaatacaaaacacacagttctggaaggttatagatgtatgatt 180
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 689 gcagaagctaataaatcaaatacaaaatacacagttctggaaggttatagatgtatgatt 630
Query: 181 gaagtaaatttaataaatgaagtgactgtccatttaggacttgaactagttagtgtttac 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gaagcaaatttaataaatgaagtgactgtccatttaggacttgaactagttagtgtttac 570
Query: 241 tacctgtctgcactgtggtgcctggtactccccatatcctcagaacgaggtgcacagggt 300
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 569 tacctgtctgcactgtggtgcctggtactctccatatcctcagaacgaggtgcacagggt 510
Query: 301 gaataactaaccttaacttgatagaaagaaaataacagaatttgatgtagagagaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 509 gaataactaaccttaacttgatagaaagaaaataacagaatttgaagtagagacaaaggc 450
Query: 361 atcctgagattgaaagccaccacagtttaagactccccttcttttctgaagtaaaatgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atcctgagattgaaagccaccacagtttaagactccccttcttttctgaagtaaaatgta 390
Query: 421 cttccagattgtagcaggacacaaatcatcccacctgccacctgcctaacaaccgaggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cttccagattgtagcaggacacaaatcatcccacctgccacctgcctaacaaccgaggca 330
Query: 481 ctgtca 486
||||||
Sbjct: 329 ctgtca 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
