Query= MSMg01no380_n21.b1 MSMg01no380_n21.b1 CHROMAT_FILE:
MSMg01no380_n21.b1 PHD_FILE: MSMg01no380_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:03 2005
(562 letters)
>mm_chr16_15815582_15816543
Length = 962
Score = 1071 bits (554), Expect = 0.0
Identities = 560/562 (99%)
Strand = Plus / Minus
Query: 1 aactcaaatatatttgcatggttttgcttttaccatcccaaatgtttacactcaatacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 aactcaaatatatttgcatggttttgcttttaccatcccaaatgtttacactcaatacta 644
Query: 61 tctgatcagccccaaaccaaaccattacctctcaacaaatgctttatttttatgaccaga 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 643 tctgatcagccccaaaccaaaccattacctctcaacaaatgctttattgttatgaccaga 584
Query: 121 agaagtgtttttaaaggagtagctttcgctgcttattataaaagggtagataatggcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agaagtgtttttaaaggagtagctttcgctgcttattataaaagggtagataatggcctg 524
Query: 181 tgggtagttatcagcaatttcttccacagtatgttgtactgcaatagcttcctctttgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tgggtagttatcagcaatttcttccacagtatgttgtactgcaatagcttcctctttgtc 464
Query: 241 cagtaaggccatcatgtggctgatccagccaatgaactgccagcaaggaatagatgaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cagtaaggccatcatgtggctgatccagccaatgaactgccagcaaggaatagatgaaat 404
Query: 301 ctaaaattcagaaaagtacagtttgaaaatgaacagaacatttaaaaatatttgcataaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ctaaaattcagaaaagtacagtttgaaaatgaacagaacatttaaaaatatttgcataaa 344
Query: 361 ggtaaaatatgttccaaatgaaaacgcttaaatacgagtctactctctcttagctctttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggtaaaatatgttccaaatgaaaacgcttaaatacgagtctactctctcttagctctttt 284
Query: 421 ctgctaagggaccactggattcttccgaacatttcctgtacacacacacaattacttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctgctaagggaccactggattcttccgaacatttcctgtacacacacacaattacttttt 224
Query: 481 gatcaaaggatgggggcagacttgctgtggtggtttgagtgacaatggccccatgagctc 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 223 gatcaaaggatgggggcagacttactgtggtggtttgagtgacaatggccccatgagctc 164
Query: 541 attcatttgaatgctgatcccc 562
||||||||||||||||||||||
Sbjct: 163 attcatttgaatgctgatcccc 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_n21.g1 MSMg01no380_n21.g1 CHROMAT_FILE:
MSMg01no380_n21.g1 PHD_FILE: MSMg01no380_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:03 2005
(465 letters)
>mm_chr16_15623763_15624625
Length = 863
Score = 864 bits (447), Expect = 0.0
Identities = 460/465 (98%), Gaps = 2/465 (0%)
Strand = Plus / Plus
Query: 1 caagttacattaatgcctacttcatataattcaaatggtttagagatttattgtaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagttacattaatgcctacttcatataattcaaatggtttagagatttattgtaatatt 260
Query: 61 tatacaagatttaatgctacaatggctttgaaactaataatctaaggatctataaaaatt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacacaagatttaatgctacaatggctttgaaactaataatctaaggatctataaaaatt 320
Query: 121 aatgaaattcataccttgatttttttttataacctatccagcactattatgatttcaaaa 180
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 aatgaaattcataccttgattttttt--ataacctatccagcactattatgatttcaaaa 378
Query: 181 aatatagtctttagcaaagttctgctcttaatgagaaataattttaaaccaagtattact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aatatagtctttagcaaagttctgctcttaatgagaaataattttaaaccaagtattact 438
Query: 241 tttctatcatttatttaggaaaatgttttacatattaggaaaaaacagaaggcaacttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tttctatcatttatttaggaaaatgttttacatattaggaaaaaacagaaggcaacttga 498
Query: 301 tttaataatttttcaagcatatctttgttctaataatagttatgggaaaaagtctctgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttaataatttttcaagcatatctttgttctaataatagttatgggaaaaagtctctgta 558
Query: 361 aagaaagttaagtccaggtgctataaaaatccttagcccatcatatcacaataaaggatg 420
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 559 aagaaagttaagtccaggtgctataaaaatcattagcccatcatatcacagtaaaggatg 618
Query: 421 tacggctgccagttataccaagcacacaatgctccacacagtaag 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tacggctgccagttataccaagcacacaatgctccacacagtaag 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 863
Length adjustment: 10
Effective length of query: 455
Effective length of database: 853
Effective search space: 388115
Effective search space used: 388115
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
