Query= MSMg01no381_c21.b1 MSMg01no381_c21.b1 CHROMAT_FILE:
MSMg01no381_c21.b1 PHD_FILE: MSMg01no381_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:30 2005
(541 letters)
>mm_chr16_63060658_63061599
Length = 942
Score = 1033 bits (534), Expect = 0.0
Identities = 537/538 (99%), Gaps = 1/538 (0%)
Strand = Plus / Plus
Query: 5 gaattctatttatggtttgagatatatccgtagataaaatacaaaaagattatagtttat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatttatggtttgagatatatccgtagataaaatacaaaaagattatagtttat 264
Query: 65 tgacagaagcagaacagaaatagaaaccacaaatacagaaacaaaataatatacaagatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgacagaagcagaacagaaatagaaaccacaaatacagaaacaaaataatatacaagatt 324
Query: 125 caaccataacaaagaaactcaatatactaatatatataaacacaacaaagaaaagaaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaccataacaaagaaactcaatatactaatatatataaacacaacaaagaaaagaaaat 384
Query: 185 gcagtgagattgtgggagagaaccttattaaatgtgatgaatagaaaggcatttatgaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagtgagattgtgggagagaaccttattaaatgtgatgaatagaaaggcatttatgaaa 444
Query: 245 agcagactttagaacagcaatttgatggaaatgtttgagcagactctattagttacgggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcagactttagaacagcaatttgatggaaatgtttgagcagactctattagttacgggg 504
Query: 305 caaagaacattactgacagaagtaaaagttaggtcctagtgcagaagtagctttggtttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caaagaacattactgacagaagtaaaagttaggtcctagtgcagaagtagctttggtttt 564
Query: 365 attcaaagactattaaaatgtcagcgtagggtgggtcagtatgagtaaaagaaggtagaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attcaaagactattaaaatgtcagcgtagggtgggtcagtatgagtaaaagaaggtagaa 624
Query: 425 aa-tgtggaaacatgaatgggctattacattaaaggcctgtgaattaagccttccttggt 483
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaatgtggaaacatgaatgggctattacattaaaggcctgtgaattaagccttccttggt 684
Query: 484 ctatatcctttggtagtgatactcagtactgattgtgattcgggctgtgacttttaac 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctatatcctttggtagtgatactcagtactgattgtgattcgggctgtgacttttaac 742
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 942
Length adjustment: 10
Effective length of query: 531
Effective length of database: 932
Effective search space: 494892
Effective search space used: 494892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_c21.g1 MSMg01no381_c21.g1 CHROMAT_FILE:
MSMg01no381_c21.g1 PHD_FILE: MSMg01no381_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:30 2005
(423 letters)
>mm_chr16_63243947_63244769
Length = 823
Score = 803 bits (415), Expect = 0.0
Identities = 421/423 (99%)
Strand = Plus / Minus
Query: 1 tccattccagatggaggatacagagttgatgaatgttgtgaaagtgtaagtaggatagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tccattccagatggaggatacagagttgatgaatgttgtgaaagtgtaagtaggatagaa 564
Query: 61 gtaaacattcagagtacagtggctaaaactgagttgtatggtgagataccaagagcatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtaaacattcagagtacagtggctaaaactgagttgtatggtgagataccaagagcatca 504
Query: 121 cagaaaaaaatctcaaatgcgtccgtgacatatataaaatgtagactggatgaagaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cagaaaaaaatctcaaatgcgtccgtgacatatataaaatgtagactggatgaagaaaag 444
Query: 181 ggcactgggctctaacagtatgttgttacaaaagacattaaaacccagatgaagaatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggcactgggctctaacagtatgttgttacaaaagacattaaaacccagatgaagaatagt 384
Query: 241 actacagaggtagatgttcatgctgatataaaagccttacataaatgagatatggatatg 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 383 actacagaggtagatgttcatgctgatataaaagccttatataaatgagatatggatatg 324
Query: 301 gaaagtgactgggagatgaggacatggcttcaaccaaaggtttttgtctggaccttaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaaagtgactgggagatgaggacatggcttcaaccaaaggtttttgtctggaccttaata 264
Query: 361 gcatatacactacagacactgtgatcctaaaggagatggggtagttttaaaaatagcaga 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcatatacaccacagacactgtgatcctaaaggagatggggtagttttaaaaatagcaga 204
Query: 421 tgt 423
|||
Sbjct: 203 tgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
