Query= MSMg01no381_d20.b1 MSMg01no381_d20.b1 CHROMAT_FILE:
MSMg01no381_d20.b1 PHD_FILE: MSMg01no381_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:34 2005
(164 letters)
>mm_chr16_49838621_49839184
Length = 564
Score = 282 bits (146), Expect = 6e-81
Identities = 152/154 (98%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 7 gaattcagtaccaattgtgtgccaggcactaagctatactttctctgacagattcacaat 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcagtaccaattgtgtgccaggcactaagctatactttctctgacagattcacaat 266
Query: 67 gcatcatgagcaccagctaagtacaaaatgtggtatatttaaatgtgacattatgccttc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gcatcatgagcaccagctaagtacaaaatgtggtatatttaaatgtgacattatgccttc 326
Query: 127 ctggtggtaccattggtgggggtaggggt-gggg 159
||||||||||||||||||||||| ||||| ||||
Sbjct: 327 ctggtggtaccattggtgggggtgggggtagggg 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no381_d20.g1 MSMg01no381_d20.g1 CHROMAT_FILE:
MSMg01no381_d20.g1 PHD_FILE: MSMg01no381_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:35 2005
(428 letters)
>mm_chr16_49996990_49997817
Length = 828
Score = 737 bits (381), Expect = 0.0
Identities = 384/385 (99%)
Strand = Plus / Minus
Query: 1 acatttggtttggccgcatgcctgggtttgagttgtaggaaaatgttcaccacatggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acatttggtttggccgcatgcctgggtttgagttgtaggaaaatgttcaccacatggaag 326
Query: 61 acactaggagtcactgttctttggaatagagcatagaggtcagaaggggcctttcaagga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 325 acactaggagtcactgttctttggaatagagcatagaggtcaggaggggcctttcaagga 266
Query: 121 gtggggacatgccagactagatggcagtgcctcgatacacatgtatgtagacgcaatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtggggacatgccagactagatggcagtgcctcgatacacatgtatgtagacgcaatcta 206
Query: 181 ggctttcttgctaacaagcgcattctgatccagtgggtcttggcctgaatacaacctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggctttcttgctaacaagcgcattctgatccagtgggtcttggcctgaatacaacctttc 146
Query: 241 taacaagctgctgaatgatgcaggagctgctgatctgtggctcactatgaaccacagggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 taacaagctgctgaatgatgcaggagctgctgatctgtggctcactatgaaccacagggg 86
Query: 301 accagggcaataacagcatctccaagttggtggcctttggtcagtaataaatgttaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 accagggcaataacagcatctccaagttggtggcctttggtcagtaataaatgttaatga 26
Query: 361 taatagcttacatgcaaaatgcaaa 385
|||||||||||||||||||||||||
Sbjct: 25 taatagcttacatgcaaaatgcaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
