XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAATG
CTTCCTGTCTCAGACCAGCCTGGGCTATGCGGTACAAACTTCCACAAAAC
AAAAACAAACAAAGAACCAAGGAAAGAGGAGGGAGGTTGCAAGTTGTGAC
AGATCCACAGATCCCGCCTGGTGTCCTATAGGCTCTGCTGGAAAGTGCTT
TCGGCCCTTCGTCCCAGGCTTCCCAGGGCTTCTATTTGCCCAACTCCTGG
TTATTCTTTCATTCTGTTGTTGTTTTTGTTGTGTTTTGTTTTATTTTTGT
CTTTATGTTTTTACGCAAGTGGTGAACCAGGTTTACCAAAATTTATCTAC
TTAAAATAATTTGTAATCATTGATTTGTGATGCTACTTTTATGCTCTATA
AAGTAATCCAATTTATATCTCCTAAAAGTTAATACATTGTTGCTGATCGT
GTCAGTTTATATGCTGTATCANATGTGACTCAGAAAGAAGTACACTTACA
CTGTATTCCCTGAAACTCTCATTCAAAATTATTTTTTAAATGAGAATACT
ATTTTAGAATATATAAAAAAGACTTTTCTCATGTAAAAAGAAATCCTTTG
TGCTAATTGCTACAGATCTTTTTTAAACTTACATACTTGCTCCGAACGTT
TCTTGAAAACCATGATATTCCCCATTCCCTTATAGAATTTTTTCCCTAAG
GATCTTAAAATGTTCTTT

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCACATGTGAACTTGACTCAATAGAAC
TCCCAAAATACAGTACTTCAACACACACACACACACACACACACACACAC
ACACACACACACACACACACATATACACATGTATACATACATATATACAT
ATGTGTATATGTATGTGTATGTATATATATATATATGTATATGTGTGTGN
GTGNNNNTTNNNNNNNNNNNNNNNNNNNNNNNNTNNTTTTTTTTTTTTTT
TTTTTTTTNNTTTTNNTTTTTTTTTTTTTTNNTNNTTTNNNNNNTTNNNT
TTNNTNTTTTTTTTTTTTTTTTTTTTTNNTTTTTTNNNNNNTTTTTTTTT
TTTTTTTTTTTTTTTTNCCCCTTTTTTTTTTNTTNTTTTTTTTTTTNTTT
TTTCTTTTTTTTTTTNNTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTT
TTCCTTTTTTTCCTCTTTCCTTTCCCTTCTTTCTTTCTTCCCTTCCCCTT
CTCTTTCCCCCTTCTCTTCTTTCTCTCTTTTCCCCTCTTCCCTCCCTTCT
TCCCCTTCTTCTTTTCCCTTTTTTTTCCTCCTTTTTCTTCCCTCCCCTCC
CCTTTTTCTTTTTCCTTTTTTTTCCCTTTTCCTCCTTCCCCTTTTTTCTT
TTTCCCCTTTCCCTCTCTTTTCTTTTTTTTTTCTTTCTTCTCCCTCTTTT
TTCCCCNTTTTCTTTTCTCCCCCCTTTCCTTCTTTT

Query= MSMg01no381_h05.b1 MSMg01no381_h05.b1 CHROMAT_FILE:
MSMg01no381_h05.b1 PHD_FILE: MSMg01no381_h05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:52 2005
         (481 letters)



>mm_chr16_77054512_77055392
          Length = 881

 Score =  857 bits (443), Expect = 0.0
 Identities = 469/478 (98%), Gaps = 1/478 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattc-aatgcttcctgtctcagaccagcctgggctatgcggtacaaacttccacaaaa 63
           |||||| |||||  ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 204 gaattcaaatgcagcctgtctcagaccagcctgggctatgcagtacaaacttccacaaaa 263

                                                                       
Query: 64  caaaaacaaacaaagaaccaaggaaagaggagggaggttgcaagttgtgacagatccaca 123
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 caaaaacaaacaaagaaccaaggaaagaggagtgaggttgcaagttgtgacagatccaca 323

                                                                       
Query: 124 gatcccgcctggtgtcctataggctctgctggaaagtgctttcggcccttcgtcccaggc 183
           ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gatcccgtctggtgtcccataggctctgctggaaagtgctttcggcccttcgtcccaggc 383

                                                                       
Query: 184 ttcccagggcttctatttgcccaactcctggttattctttcattctgttgttgtttttgt 243
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 384 ttcccagggcttctatttgcccaactcctggtttttctttcattctgttgttgtttttgt 443

                                                                       
Query: 244 tgtgttttgttttatttttgtctttatgtttttacgcaagtggtgaaccaggtttaccaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtgttttgttttatttttgtctttatgtttttacgcaagtggtgaaccaggtttaccaa 503

                                                                       
Query: 304 aatttatctacttaaaataatttgtaatcattgatttgtgatgctacttttatgctctat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aatttatctacttaaaataatttgtaatcattgatttgtgatgctacttttatgctctat 563

                                                                       
Query: 364 aaagtaatccaatttatatctcctaaaagttaatacattgttgctgatcgtgtcagttta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaagtaatccaatttatatctcctaaaagttaatacattgttgctgatcgtgtcagttta 623

                                                                     
Query: 424 tatgctgtatcanatgtgactcagaaagaagtacacttacactgtattccctgaaact 481
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatgctgtatcaaatgtgactcagaaagaagtacacttacactgtattccctgaaact 681


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)