Query= MSMg01no382_d23.b1 MSMg01no382_d23.b1 CHROMAT_FILE:
MSMg01no382_d23.b1 PHD_FILE: MSMg01no382_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:56 2005
(564 letters)
>mm_chr16_81591554_81592518
Length = 965
Score = 922 bits (477), Expect = 0.0
Identities = 489/493 (99%), Gaps = 3/493 (0%)
Strand = Plus / Minus
Query: 74 acacacacacacacacacttggaatttaattacttcaagtatcttcagaaactttctcct 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 acacacacacacacacacttggaatttaattacttcaagtatcttcagaaactttctcct 556
Query: 134 atgggaaacatttcatcatccaatttcacactcatatgaaatatatgctatttatttgct 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 atgggaaacatttcatcatccaatttcacactcatatgaaatatatgctatttatttgct 496
Query: 194 atttataggttatttatttaccaatagaatactgagacaagaaaaatgaatacaatggct 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atttataggttatttatttaccaatagaatactgagacaagaaaaatgaatacaatggct 436
Query: 254 acattttatttttaacaggttgtattattacttaaagcttactttgtattttataaggta 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acattttatttttaacaggttgtattattacttaaagcttactttgtattttataaggta 376
Query: 314 ttattatgggatgcagtatgagaatgttattcattgaacaatatattgtgataaaaatgt 373
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 375 ttattatgggatgcagtatgagaatgttattcattgaacaatatagtgtgataaaaatgt 316
Query: 374 ctgtttctagcctcataaatattagttttt-attgagaaagttaaataaat-aaaaaaat 431
|||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||
Sbjct: 315 ctgtttctagcctcataaatattagtttttaattgagaaagttaaat-aataaaaaaaat 257
Query: 432 tatgttattatatttctatggtgatgttgtaagacaacataaattcataaaattaattca 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tatgttattatatttctatggtgatgttgtaagacaacataaattcataaaattaattca 197
Query: 492 ttgcacatataaaatcacatttattattttacataaatcttcatttttgtttataaacta 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 ttgcacatataaaatcacatttattattttacataaatcttcatttttgtttataaacta 137
Query: 552 ctaaaatttttat 564
|||||||||||||
Sbjct: 136 ctaaaatttttat 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 965
Length adjustment: 10
Effective length of query: 554
Effective length of database: 955
Effective search space: 529070
Effective search space used: 529070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_d23.g1 MSMg01no382_d23.g1 CHROMAT_FILE:
MSMg01no382_d23.g1 PHD_FILE: MSMg01no382_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:56 2005
(523 letters)
>mm_chr16_81527605_81528525
Length = 921
Score = 969 bits (501), Expect = 0.0
Identities = 514/519 (99%), Gaps = 2/519 (0%)
Strand = Plus / Plus
Query: 1 tctgaaatgagtccttattttcgttttcatacatagttatgaatgcgatatcacaaagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaaatgagtccttattttcgttttcatacatagttatgaatgcgatatcacaaagca 260
Query: 61 gataaatggcctgagtacttatcaaaccattaacacgaattgtgatttaaaaatgaacat 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gataaatggcctgagtacgtatcaaaccattaacacgaattgtgatttaaaaatgaacat 320
Query: 121 ttgaataatataagtttctatctcaaattgtgccattaaagacatttcttattacagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaataatataagtttctatctcaaattgtgccattaaagacatttcttattacagtac 380
Query: 181 aagctatcttcgggaattaataagaaattacttggggatatgcatgttatattatgaacc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagctatcttcaggaattaataagaaattacttggggatatgcatgttatattatgaacc 440
Query: 241 tgtaatcaaagtgctaaagaatggagagatatcactactctctactttcctctgtcagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaatcaaagtgctaaagaatggagagatatcactactctctactttcctctgtcagat 500
Query: 301 ctctgacttgacatttttgaagttttcaaatataatggctggagtattctgaaaagatga 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctgacttgacatttttgaaattttcaaatataatggctggagtattctgaaaagatga 560
Query: 361 gtgggaatataacacagcccaggaggaaaatgaaattgtatatatatatcatgtcagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 gtgggaatataacacagcccaggaggaaaatgaaattgtatatatat--catgtcagaaa 618
Query: 421 agtttcaatttctatagtaggaacaatgtgatgatattttacaacaaaaataccaaaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agtttcaatttctatagtaggaacaatgtgatgatattttacaacaaaaataccaaaatc 678
Query: 481 ttgcaataaattagctattgatcatttactctacatttt 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttgcaataaattagctattgatcatttactctacatttt 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 921
Length adjustment: 10
Effective length of query: 513
Effective length of database: 911
Effective search space: 467343
Effective search space used: 467343
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
