CGCTATACGACTCACTATATTCAGAGGATCCGCGGAATTCTTCTGCACTT
TCAAATATAGAGCTATTTACCAATACTGTGGAGTGATTTTAAAACAATTG
TCACAAGCCTGATGGAAGTATGTACTTATATGTATATGTGTAATGGTCCC
TATGGGGAAACCTGTCCACTTATTGATAAGGCCTTTTACAGATTGGCCAA
AGATGCCCACCACAAATTCTCAAAAGGCTTTGGGGAAGGGATCACTCAAA
ACCAAGAAGTGTTGGTGCAGTTTGAAAATCAGATATTAAAATTCAAATAT
TGGCTGGACCTGATGGCACATGCCTTTAATCCCAGCACTCAGGAGGCAGA
GGCAGGCAGACCTCTGTGAGTTCAAGGCCAGCCTGGTCTATAGAATGAGT
CCCAGGACAGCCACAACTACATAGAGGGACCCTGTCTCATCAAAAACAAA
CAAACAAAAAAATCCAAACATACACACATACAAAAGAATTCAAATATAGA
CTTCTGAGTAAACAGAGTCACATAAATTATAGTCTCAATGCATTTCATAC
TTTGTTCATTTGGCCATGTGGACTTCAGAAGTCAACAAATCAACTCCCAT
GTGACGAGAATTCTCCCTGTATTATCCCTAATGGTTTTGAATGGTCCTAA
TGGTTTTCCAGAGAAAAACTGACCCACCTGGGCTGTCTGAAAATGGTAGA
TTTCTGCCTATGAGCAATAACTTATCTTACCTATTATACTCCTATTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXAGTAGTTCTTCAGTCCACAAGGCTGGACGTCTCAGCTGGTCTTCA
GTGTGCACTGGGATCCTGAAGAAGTTGGCTCTAAGGCTGGTGAAGGAATG
GACCTTCTAGCAAGGCTAGAAAAAGCAGGCTAAGAGTGAAGCTTCCTTCC
TCTGTGGCTTATGTAGACTTCTGGCAGATGTGAACCTGATTAGAGATGGG
TTTTCCCATCTCAAAAGATCTGGATTAAAGGTGTGTCTTCCCACCTCCAA
GATCCAGATTAGAAGTGAGTCTTCCTACTTCAGATCAGGCATATAATCTC
TCACAGGGGCGCCCTCCATTTGGGGGTTTTAGTTAATTCCAAATGTAGTC
AATTTGACAATCAAGAATAGCCACTGATCGCCGGGCGGTGGTGGCACACG
CCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCG
AGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAG
AGAAACCCTGTCTCAAAAACCAAAAAAAAAAAAAAGATAGCCCCTGATCG
CCATATCCAGGCCCTGGTCTGGTTTCCGGGGGCCCTTATTAATGGTGCCC
GGGAAATAACTGTATAAAGCTCCCCCCCTAAACCCTCCTGTGTGCCGGTA
AACACAAGCCGCCCAGGCCCCCCTACTGGCCCCGGGGGGTCTTAACACAA
CCC

Query= MSMg01no382_i09.b1 MSMg01no382_i09.b1 CHROMAT_FILE:
MSMg01no382_i09.b1 PHD_FILE: MSMg01no382_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:17 2005
         (536 letters)



>mm_chr16_33969311_33970246
          Length = 936

 Score = 1029 bits (532), Expect = 0.0
 Identities = 535/536 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatagagctatttaccaatactgtggagtgattttaaaacaattgtcacaagcctgatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatagagctatttaccaatactgtggagtgattttaaaacaattgtcacaagcctgatgg 260

                                                                       
Query: 61  aagtatgtacttatatgtatatgtgtaatggtccctatggggaaacctgtccacttattg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtatgtacttatatgtatatgtgtaatggtccctatggggaaacctgtccacttattg 320

                                                                       
Query: 121 ataaggccttttacagattggccaaagatgcccaccacaaattctcaaaaggctttgggg 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaggccttttacagattggccagagatgcccaccacaaattctcaaaaggctttgggg 380

                                                                       
Query: 181 aagggatcactcaaaaccaagaagtgttggtgcagtttgaaaatcagatattaaaattca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagggatcactcaaaaccaagaagtgttggtgcagtttgaaaatcagatattaaaattca 440

                                                                       
Query: 241 aatattggctggacctgatggcacatgcctttaatcccagcactcaggaggcagaggcag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatattggctggacctgatggcacatgcctttaatcccagcactcaggaggcagaggcag 500

                                                                       
Query: 301 gcagacctctgtgagttcaaggccagcctggtctatagaatgagtcccaggacagccaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagacctctgtgagttcaaggccagcctggtctatagaatgagtcccaggacagccaca 560

                                                                       
Query: 361 actacatagagggaccctgtctcatcaaaaacaaacaaacaaaaaaatccaaacatacac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actacatagagggaccctgtctcatcaaaaacaaacaaacaaaaaaatccaaacatacac 620

                                                                       
Query: 421 acatacaaaagaattcaaatatagacttctgagtaaacagagtcacataaattatagtct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acatacaaaagaattcaaatatagacttctgagtaaacagagtcacataaattatagtct 680

                                                                   
Query: 481 caatgcatttcatactttgttcatttggccatgtggacttcagaagtcaacaaatc 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caatgcatttcatactttgttcatttggccatgtggacttcagaagtcaacaaatc 736


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space:   487076
Effective search space used:   487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)