Query= MSMg01no382_i22.b1 MSMg01no382_i22.b1 CHROMAT_FILE:
MSMg01no382_i22.b1 PHD_FILE: MSMg01no382_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:20 2005
(489 letters)
>mm_chr16_32862586_32863474
Length = 889
Score = 891 bits (461), Expect = 0.0
Identities = 479/485 (98%)
Strand = Plus / Plus
Query: 5 gaattccttactctatggactataaccatggctgacatgcaagccccttagtacagagtt 64
||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattccttcctctagggactataaccatggctgacatgcaagccccttagtacggagtt 264
Query: 65 catacactcacttggtctcaatttaaatactttcctactagaatccctcactctaataca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catacactcacttggtctcaatttaaatactttcctactagaatccctcactctaataca 324
Query: 125 acaaagtctacttagtgtagtctatcaccggcatgttgaccctactctgacttctggtgt 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaaagtctacctagtgtagtctatcaccggcatgttgaccctactctgacttctggtgt 384
Query: 185 tttatttaccagagcctcctacttagaacatcttgtcacctcacgcagggattcaggctc 244
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 tttatttaccagatcctcctacttagaacatcttgtcacctcacacagggattcaggctc 444
Query: 245 agctctagctcaacttcttctcagagatattaagtaatctgcttcactatgattgctttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctctagctcaacttcttctcagagatattaagtaatctgcttcactatgattgctttg 504
Query: 305 ttaggatccgtagatcctgtgctatcaatagaccattcttggtaacactttaaaatcgtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaggatccgtagatcctgtgctatcaatagaccattcttggtaacactttaaaatcgtt 564
Query: 365 attttaattactacatgcagcttgtgccaattatgctgtctatggtcaacccaacaagtt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attttaattactacatgcagcttgtgccaattatgctgtctatggtcaacccaacaagtt 624
Query: 425 gatgaaacacatgtaaggaatgactttacaagagaagggtgaggctgggggtggtggtgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gatgaaacacatgtaaggaatgactttacaagagaagggtgaggctgggggtggtggtgg 684
Query: 485 tagtg 489
|||||
Sbjct: 685 tagtg 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_i22.g1 MSMg01no382_i22.g1 CHROMAT_FILE:
MSMg01no382_i22.g1 PHD_FILE: MSMg01no382_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:20 2005
(468 letters)
>mm_chr16_33016192_33017061
Length = 870
Score = 731 bits (378), Expect = 0.0
Identities = 429/470 (91%), Gaps = 38/470 (8%)
Strand = Plus / Minus
Query: 1 tcacctagcatcatgtgcatgcacatgtagttaataaacattggctctgcctgtcttgca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tcacctagcatcatgtgcacgcacatgtagttaataaacattggctctgcctgtcttgca 452
Query: 61 gggcgaccattagtctagggttggtggtgttgggggacagcacataaaacacctcttaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gggcgaccattagtctagggttggtggtgttgggggacagcacataaaacacctcttaca 392
Query: 121 taagcagttccagtgacttttctggggacagatagggatggaagcatctgatacaagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 taagcagttccagtgacttttctggggacagatagggatggaagcatctgatacaagatg 332
Query: 181 gaaatggcatgtagatacacagtcctccaggggtaaagaatggggcacgggttctccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gaaatggcatgtagatacacagtcctccaggggtaaagaatggggcacgggttctccaga 272
Query: 241 ggctagtttaga--tacacttgtcaaaggagacacaactatgtccatcatctggatttta 298
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ggctagtttagagatacacttgtcaaaggagacacaactatgtccatcatctggatttta 212
Query: 299 agacgtaaagaaaccaaccaaaccaaccaaccaaccaaccaaccaaccaaccaaccaacc 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 agacgtaaagaaaccaaccaaaccaaccaaccaaccaaccaaccaaccaaccaacca--- 155
Query: 359 aaccaaccaaccaaccaaccaaccaaccaaccagtgtgtatgtgggcccaggctttgaaa 418
|||| ||||||||||||||||| ||||
Sbjct: 154 ---------------------------------gtgtatatgtgggcccaggcttggaaa 128
Query: 419 cgtgtgcatgccacagtgtgcagggggtggagtcagaggacaggttccaa 468
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cgtgtgcatgccacagtgtgcagggggtggagtcagaggacaggttccaa 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 870
Length adjustment: 10
Effective length of query: 458
Effective length of database: 860
Effective search space: 393880
Effective search space used: 393880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
