Query= MSMg01no386_d21.b1 MSMg01no386_d21.b1 CHROMAT_FILE:
MSMg01no386_d21.b1 PHD_FILE: MSMg01no386_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:01 2005
(409 letters)
>mm_chr16_82258641_82259449
Length = 809
Score = 768 bits (397), Expect = 0.0
Identities = 406/409 (99%)
Strand = Plus / Minus
Query: 1 ctgcctgtctgcctgtctgcctgactgtctgtcaggtgagtgtttggtcagacaagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ctgcctgtctgcctgtctgcctgactgtctgtcaggtgagtgtttggtcagacaagaact 712
Query: 61 tgcaagattagattctgtcaactctataggtccgaagagttcaactcaggtctttaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 tgcaagattagattctgtcaactctataggtccgaagagttcaactcaggtctttaggct 652
Query: 121 tggcagcaggtctctgttcctgatgagccaacttgcttgctaccacttgactagttcaaa 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 651 tggcagcaggtctctgttcctgatgagccaacttgcttgcttccacttgactagttcaaa 592
Query: 181 agcctcatgacacaagttaatagtggacagatctaaatgtaaggttttttttcaataacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agcctcatgacacaagttaatagtggacagatctaaatgtaaggttttttttcaataacg 532
Query: 241 tatagttgtcatttaaacatgtaatgtacaagttattatttcttccttacctttatcaaa 300
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 531 tatagttgtcatttcaacatgtaatgtaaaagttattatttcttccttacctttatcaaa 472
Query: 301 tttatatagtgtacatcctaaatagtatccattgcttactaaattgtcattcttcttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tttatatagtgtacatcctaaatagtatccattgcttactaaattgtcattcttcttcat 412
Query: 361 tgtattgaatctggccacaaaagactgttattctgtatttaaccttacc 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgtattgaatctggccacaaaagactgttattctgtatttaaccttacc 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_d21.g1 MSMg01no386_d21.g1 CHROMAT_FILE:
MSMg01no386_d21.g1 PHD_FILE: MSMg01no386_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:01 2005
(585 letters)
>mm_chr16_82129683_82130668
Length = 986
Score = 1046 bits (541), Expect = 0.0
Identities = 576/589 (97%), Gaps = 5/589 (0%)
Strand = Plus / Plus
Query: 1 atcagtcaaggggtgacagggcttttaagagaccgtagttttgtttcacaaatgcaattt 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 atcagtcaaggggtgacagggcttttaagaggccgtagttttgtttcacaaatgcaattt 260
Query: 61 caaggagatttgccaaaacttagtctgtggatgctcagtgtgcctaaaaacatgtaactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaggagatttgccaaaacttagtctgtggatgctcagtgtgcctaaaaacatgtaactg 320
Query: 121 ccgtttgggactttaaagcatcacttgtttcatttgtttgtttgtttaaggtgggggatt 180
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatgtgggactttaaagcatcacttgtttcatttgtttgtttgtttaaggtgggggatt 380
Query: 181 acatattatttggttaaacttaaatagaagactctatgtctaatttcagtcatcatttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 acatattatttggttaaacttaaatagaagactctatgtctaatttcagtcattatttgt 440
Query: 241 ttgcttctctat-tctcaagatttattgagtacggtgcattgtgatcgtggattcagata 299
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgcttcactaactctcaagatttattgagtacggtgcattgtgatcgtggattcagata 500
Query: 300 tactaacaattctgcttagtttttaaaattcataaacattgaaggtgcagtacgatagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tactaacaattctgcttagtttttaaaattcataaacattgaaggtgcagtacgatagaa 560
Query: 360 ctttctctgaggtcaggaaacacacacatccacctccttatcccacccagatagagaaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctttctctgaggtcaggaaacacacacatccacctccttatcccacccagatagagaaaa 620
Query: 420 taatatcaaaatccaactaactgaaccagtgggattaaattcagccactagcagcagtgt 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 taatatcaaaatccaactaactgaaccagtgggattaaattcagccaccagcagcagtgt 680
Query: 480 gcaggaaggatgacttgaaaagagttgggatgactcaaaagcagaggaatcac---aaaa 536
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 gcatgaaggatgacttgaaaagagttgggatgactcaaaagcagaggaatcaccaaaaaa 740
Query: 537 aaaaaaaaaaagccctttctagtactgatggggactcttgaatgctgga 585
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaaaaaaaaagcc-tttctagtactgatggggactcttgaatgctgga 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 986
Length adjustment: 10
Effective length of query: 575
Effective length of database: 976
Effective search space: 561200
Effective search space used: 561200
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
