Query= MSMg01no387_e19.b1 MSMg01no387_e19.b1 CHROMAT_FILE:
MSMg01no387_e19.b1 PHD_FILE: MSMg01no387_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:19 2005
(563 letters)
>mm_chr16_71616398_71617360
Length = 963
Score = 1011 bits (523), Expect = 0.0
Identities = 550/559 (98%)
Strand = Plus / Plus
Query: 5 gaattccttccatcctaccaggaaagcggggcctcaagaaactttctgttcacattatat 64
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 205 gaattccttccatcctaccaggaaagcggggcctcaagaaacttgctattcacattatat 264
Query: 65 ctattgtctgtacatagaatgcgtgaatagttagtgagaatggtttataaaatctcaggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctattgtctgtacatagaatgcgtgaatagttagtgagaatggtttataaaatctcaggg 324
Query: 125 cttatctccactgacccacttattccagtgagtcttacattcaaattacaacaatcccca 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttatctccagtgacccacttattccagtgagtcttacattcaaattacaacaatcccca 384
Query: 185 aacactgaaagcaaacaacaacatatacaaataatagtgtatgggaaagtatgccaatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacactgaaagcaaacaacaacatatacaaataatagtgtatgggaaagtatgccaatgt 444
Query: 245 tatacatcaagacagtaaaacaggttcactgcgataaatagtagtttattggagaaccta 304
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 tatacatcaagatagtaaaacaggtttactgcgataaatagtagtttattggagaaccta 504
Query: 305 tcacatcatatcaatatcaataccaaacatatactatgaaaaagggagagtctatctttg 364
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 505 acacatcatatcaatatcaataccaaacatatactatgaaaaaggaagagtcaatctttg 564
Query: 365 ttaaaatatagtgcactatatggcctgctactgaaaatatattttaaaaaatcaagatat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttaaaatatagtgcactatatggcctgctactgaaaatatattttaaaaaatcaagatat 624
Query: 425 tacatagaagtaatcaggatattatcaatattcagtttactcttattcagtttaatgaat 484
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 625 tacatagaagtaatcaggatattatcaatattcagtttactattattcagtttaatgaat 684
Query: 485 aggaatgaattatcaatattcagtttaattaaagctaaaatatatttggattatgggttt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggaatgaattatcaatattcagtttaattaaagctaaaatatatttggattatgggttt 744
Query: 545 taatcccccaactcttctt 563
|||||||||||||||||||
Sbjct: 745 taatcccccaactcttctt 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_e19.g1 MSMg01no387_e19.g1 CHROMAT_FILE:
MSMg01no387_e19.g1 PHD_FILE: MSMg01no387_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:19 2005
(387 letters)
>mm_chr16_71781105_71781895
Length = 791
Score = 698 bits (361), Expect = 0.0
Identities = 382/391 (97%), Gaps = 4/391 (1%)
Strand = Plus / Minus
Query: 1 ttcgcacatgacaagtccaattgtaatttcatttgactttaagtgctaaaattcaatttt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 591 ttcgcacatgacaagtccaattataatttcatttgactttaagtgctaaaattcaatttt 532
Query: 61 ccttcaccctcatttaaaatcatgaggtcattaatctaatttcattgttgtgtgtgatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 531 ccttcaccctcatttaaaatcatgaggtcattaatctaatttcattgttgtgtatgatta 472
Query: 121 aatattattttattgaatgcataatgcattctttttaaatattactgatacaataatga- 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aatattattttattgaatgcataatgcattctttttaaatattactgatacaataatgaa 412
Query: 180 ---aattattgttttatttgattaatatccaccagcttcaaaaccttgttttctcagagt 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 attaattattgttttatttgattaatatccaccagcttcaaaaccttgttttctcagagt 352
Query: 237 ttatgctaatatatagtaatcttcttttaatcctagagagagctacaagtgtgaattagg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttatgctaatatatagtaatcttcttttaatcctagagagagctacaagtgtgaattagg 292
Query: 297 aggggtgaaatcctgcatgctcaatatatgttaattctgaaaggatagagagggatcata 356
||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 291 aggggtgaaatcctgcatgctcaatatatgttaattccaaaaagatagagagggatcata 232
Query: 357 gtgttctaaatgcaaatttataggggcatac 387
|||||||||||||||||||||||||||||||
Sbjct: 231 gtgttctaaatgcaaatttataggggcatac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 791
Length adjustment: 9
Effective length of query: 378
Effective length of database: 782
Effective search space: 295596
Effective search space used: 295596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
