NAAAATAGTTTCAATGTCCCNNNNNANTCNCTATTTTCAGAGGATCCGCG
GAATTCTTGTTTCTTCCCCCCATTCTATTTTCTCTTTAAGGCAGTTGCAT
TTCCTCCTACCACTCCCAGTTAAAAAGACCCAACAGCTAACCATGATATC
TCATTATCAAGCAGGTGAGATGGGTCAGTGGGTAAGAGCATTGACTGCTC
TTCCAAAGGTTCTGAGTTCAAATCCCAGCAACCACATGCTGGCTCACAAC
CACTCATAATGAGATCTGACGCCCTCTTCTGGTGTATCTGAAGACAGCTA
CAGTATACTTATTAATAATAATAAAGGAATCTTTGGGCCAGAGTGAGTGG
GGCCTACCAGAGCAAGCGGAACCAACCAGAGTGGGGTTGACCAGAGTGAG
CAGAGGTCCTAAATTCAATTCCCAAAAACCACATGAAGGCTCACAACCAT
CTGTACAGCTACAGTGTACTCCTACCTAATATAAATACATAAATAAATAT
TTTAACAAAAGAAATCTCCTTACTCTCTTCCCCAAGAAAGTTTCACAAGT
CCTCCCACCAAAGTACATCCTCGCTATCTGATGGACCGCGCACCCATCCC
ATCTCCAATACAACCCCCTCCACCGAACATATTTTACTAGCCCACACCCC
CCATTTCCCGATCTTTCTGAAACTCTTCCAACCCCAACGTAAAAAACCCA
AAACTTCCTTTCCCACCACTCGGCCTCACCCTATTTCCACCCGTTCGCTC
CCCCCCC

NNNNTTTTTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCCAAGGCCTAC
CTATGTCCCTCAGAGAATTCCTTTTCACTTGTGAAGGGACAGCTGCTGTT
TATCATACAGTTCCCTTTCACAGCTCTGCTGTGAGACTGCTGTCGCCATC
GCTCCGCCCCCTTTCTTTCTTTTCTCCTCTTTCTTTCTTTCTTTTTTTTT
TCTGTTATATTAGTGTTCTTTGGGAACTCAAACATAAGCTCTCTGTTTAG
TGTAACTGAAAACTTAGGAAAAGAGCTGAACTCATTATCAAGTGTTGCTT
ACAACTTTAAATAATGTGCTTAGTGAGTTTAAAGCATCAGATCCACTTAT
ACACACTGCAAAATGCTCCCACGCAAGTTTTGGAAACAGAGGGAAACTGT
ATTCAATATATTTTTTGTGTTATTCCAAGACTTTAAACTATAGTCATTCT
ACTTGAAAAGTTTTCTGGNAGATTAAATAAAAAAGCNAACTGAAGATATA
ACTTGAAAATATGACGGAAATATTCTCTAAACATAAACACATCCTGTTTT
CCTGGGTTTTTCAAAAGGAGACCCCTGTAATCCTAGCCCCCAGAATTCTG
TCCCTCCAACGGAAAAAAATTTTTATGGTAAGTTTGACCTGTTGGAAAAT
GATACAACTTTTAAAAACCCCCCCTCCAGGAAAATTCCATTCCTAAATCC
CGCGTGGGGC

Query= MSMg01no389_a22.g1 MSMg01no389_a22.g1 CHROMAT_FILE:
MSMg01no389_a22.g1 PHD_FILE: MSMg01no389_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:32 2005
         (425 letters)



>mm_chr16_50524311_50525135
          Length = 825

 Score =  814 bits (421), Expect = 0.0
 Identities = 424/425 (99%), Gaps = 1/425 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttttccaaggcctacctatgtccctcagagaattccttttcacttgtgaagggacagctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ttttccaaggcctacctatgtccctcagagaattccttttcacttgtgaagggacagctg 731

                                                                       
Query: 61  ctgtttatcatacagttccctttcacagctctgctgtgagactgctgtcgccatcgctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ctgtttatcatacagttccctttcacagctctgctgtgagactgctgtcgccatcgctcc 671

                                                                       
Query: 121 gccccctttctttcttttctcctctttctttctttcttttttttttctgttatattagtg 180
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 670 gccccctttctttcttttctcctctttctttctttc-tttttttttctgttatattagtg 612

                                                                       
Query: 181 ttctttgggaactcaaacataagctctctgtttagtgtaactgaaaacttaggaaaagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttctttgggaactcaaacataagctctctgtttagtgtaactgaaaacttaggaaaagag 552

                                                                       
Query: 241 ctgaactcattatcaagtgttgcttacaactttaaataatgtgcttagtgagtttaaagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctgaactcattatcaagtgttgcttacaactttaaataatgtgcttagtgagtttaaagc 492

                                                                       
Query: 301 atcagatccacttatacacactgcaaaatgctcccacgcaagttttggaaacagagggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 atcagatccacttatacacactgcaaaatgctcccacgcaagttttggaaacagagggaa 432

                                                                       
Query: 361 actgtattcaatatattttttgtgttattccaagactttaaactatagtcattctacttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 actgtattcaatatattttttgtgttattccaagactttaaactatagtcattctacttg 372

                
Query: 421 aaaag 425
           |||||
Sbjct: 371 aaaag 367


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space:   339456
Effective search space used:   339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)