Query= MSMg01no390_n21.b1 MSMg01no390_n21.b1 CHROMAT_FILE:
MSMg01no390_n21.b1 PHD_FILE: MSMg01no390_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:55 2005
(508 letters)
>mm_chr16_63620914_63621822
Length = 909
Score = 901 bits (466), Expect = 0.0
Identities = 501/518 (96%), Gaps = 10/518 (1%)
Strand = Plus / Minus
Query: 1 aattctctaaagctgcccactatctgttatagacgtgggctcttccagttccaacaaaga 60
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 542 aattctctaaagcagcccactatctgttatagacatgggctcttccagttccaacaaaga 483
Query: 61 aatttttctaaatattatcactagtaaattgtaaccaatcataatgttgcctattttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aatttttctaaatattatcactagtaaattgtaaccaatcataatgttgcctattttaga 423
Query: 121 atcaaacatttggttatcctcaaaactaaatagtatatcctggacattcaaacgtattta 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 422 atcaaacatttggttatcctcaaaactaaatagtatgtcctggacattcaaacgtattta 363
Query: 181 gaaacataatggaataaggagtttctcaaactatttttggcattatatgaggaaaaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gaaacataatggaataaggagtttctcaaactatttttggcattatatgaggaaaaattc 303
Query: 241 tattttctgcatgtgtattattttt-agttcctctggcatgcattttgctaattttagga 299
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 302 tattttctgcatgtggattattttttagttcctctggcatgcattttgctaattttagga 243
Query: 300 tcagacaaatacttagaacacaaagcagatattttcagatat--------aaactggtaa 351
|||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 242 tcagacaaatacttagaacacaaagcagatattttcagatattcagatataaactggtaa 183
Query: 352 atactgcatttcaaacttgaactcagacctatttatctgtttaggaatttgaggatgtta 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atactgcatttcaaacttgaactcagacctatttatctgtttaggaatttgaggatgtta 123
Query: 412 tgtttcaaatgcaatagatttttt-aaaaaatgaatatatatatatatatatatatatat 470
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 122 tgtttcaaatgcaatagatttttttaaaaaatgaatatatatatatatatatatatatat 63
Query: 471 atatatatatatgtananacacacacacacacacacac 508
|||||||||||| || | ||||||||||||||||||||
Sbjct: 62 atatatatatatatacacacacacacacacacacacac 25
Score = 74.2 bits (38), Expect = 2e-17
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 445 atatatatatatatatatatatatatatatatatatat 482
||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atatatatatatatatatatatatatatatatatatat 86
Score = 74.2 bits (38), Expect = 2e-17
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 445 atatatatatatatatatatatatatatatatatatat 482
||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atatatatatatatatatatatatatatatatatatat 88
Score = 72.3 bits (37), Expect = 8e-17
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 446 tatatatatatatatatatatatatatatatatatat 482
|||||||||||||||||||||||||||||||||||||
Sbjct: 48 tatatatatatatatatatatatatatatatatatat 84
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 6
Length of query: 508
Length of database: 909
Length adjustment: 10
Effective length of query: 498
Effective length of database: 899
Effective search space: 447702
Effective search space used: 447702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_n21.g1 MSMg01no390_n21.g1 CHROMAT_FILE:
MSMg01no390_n21.g1 PHD_FILE: MSMg01no390_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:55 2005
(444 letters)
>mm_chr16_63433952_63434795
Length = 844
Score = 859 bits (444), Expect = 0.0
Identities = 444/444 (100%)
Strand = Plus / Plus
Query: 1 attagttctctagagaaagtagcttttaatattactgtgtccaatataatttctcctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attagttctctagagaaagtagcttttaatattactgtgtccaatataatttctcctatt 260
Query: 61 ttttctacaatgtaatatcatttttgaatttggagcatttcagttttgtgtgtatgcgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttctacaatgtaatatcatttttgaatttggagcatttcagttttgtgtgtatgcgtc 320
Query: 121 tgaaaccatttctgtttcaccctaatgtattagatttctaccactaagataagaataaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaaccatttctgtttcaccctaatgtattagatttctaccactaagataagaataaaa 380
Query: 181 tgatacacacacaagtaccaatatttatctgtgtgtaataattaatatatattcatatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatacacacacaagtaccaatatttatctgtgtgtaataattaatatatattcatatac 440
Query: 241 ttatattaaaatcatttcttgggaatttgctaatgatctagcatctagagtggagtgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatattaaaatcatttcttgggaatttgctaatgatctagcatctagagtggagtgtat 500
Query: 301 acaaatgaaggctaattccagaggaaaacatcagaattaacttgatgtctgtgggagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaatgaaggctaattccagaggaaaacatcagaattaacttgatgtctgtgggagttt 560
Query: 361 agttggggaatgaaaagcaggttacattaataaatttcaactacaagtgggagaaaaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttggggaatgaaaagcaggttacattaataaatttcaactacaagtgggagaaaaact 620
Query: 421 ttaattaaataagaatttgcttaa 444
||||||||||||||||||||||||
Sbjct: 621 ttaattaaataagaatttgcttaa 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
