Query= MSMg01no392_d13.b1 MSMg01no392_d13.b1 CHROMAT_FILE:
MSMg01no392_d13.b1 PHD_FILE: MSMg01no392_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:40 2005
(525 letters)
>mm_chr16_70685964_70686888
Length = 925
Score = 942 bits (487), Expect = 0.0
Identities = 512/521 (98%), Gaps = 2/521 (0%)
Strand = Plus / Plus
Query: 5 gaattctctagttcaaagtcacaatctctttccataatcctcaccaaaacaatacttcac 64
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctagtccaaagtcataatctctttccataatcctcaccaaaacaatacttcac 264
Query: 65 tcctcgtaccaatctgtcttatttaggactacttttgctttggtaaaaaaaaaaaaagtt 124
||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||
Sbjct: 265 tcctcgtaccaatctgtcttagttaggactacttttgctttggt--aaaaaaaaaatgtt 322
Query: 125 ctatatattgggcttacacttctacattatagcccattattgaaggaactcaggtgagga 184
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctatatattgggtttacacttctacattatagcccattattgaaggaactcaggtgagga 382
Query: 185 actcctacaagtttggaatctggaggcagaagctgatgcagagggcatggaagggtactg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 actcctacaagtttggaatctggaggcagaagctgatgcagagggcatggaagggtactg 442
Query: 245 cttactggcttgttcagcctgcttttgtattactcacagtgagccttagctattgggaga 304
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 443 cttactggcttgttcagcctgcttttgtaagactcacagtgagccttagctattgggaga 502
Query: 305 tccccaaatgagactggagactggagttaggtgaaaagcaagaaatttattgttttatcg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tccccaaatgagactggagactggagttaggtgaaaagcaagaaatttattgttttatcg 562
Query: 365 cactagggttgtcctgcacccagaggagaggtgacccccttctctttcttttataagctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cactagggttgtcctgcacccagaggagaggtgacccccttctctttcttttataagctt 622
Query: 425 tttatacaaaatttgaggccagattatagcaactgcaactaggcacgtaatggttggtgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tttatacaaaatttgaggccagattatagcaactgcaactaggcacgtaatggttggtgg 682
Query: 485 ttctggtgacctttatattaattggctgggcagggaagggg 525
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttctggtgacctttatattaattggctgggcagggaagggg 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_d13.g1 MSMg01no392_d13.g1 CHROMAT_FILE:
MSMg01no392_d13.g1 PHD_FILE: MSMg01no392_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:36:41 2005
(491 letters)
>mm_chr16_70854783_70855673
Length = 891
Score = 926 bits (479), Expect = 0.0
Identities = 485/487 (99%)
Strand = Plus / Minus
Query: 1 ctagatgaaccacacacatcgaaaagaatcttccttgcttgtacttcctgaaaggcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctagatgaaccacacacatcgaaaagaatcttccttgcttgtacttcctgaaaggcaaca 628
Query: 61 gttaaacttcatacctacatgagggctcatttgacatgcacaattagttttcagtcagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gttaaacttcatacctacatgagggctcatttgacatgcacaattagttttcagtcagtc 568
Query: 121 actggcctgtcaaagttcatgatcatgagtcaatgcctcacctgtgagaacaaaacacac 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 567 actggcctgtcaaagttcatgatcatgagtcaatgcttcacctgtgagaacaaaacacac 508
Query: 181 ctatctatatagacccaggatgtgagcaaatgcagctttaatttggatgtagtcatttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctatctatatagacccaggatgtgagcaaatgcagctttaatttggatgtagtcatttga 448
Query: 241 tatttatcaagtccgcactatgcagaatcctcacatgatctctgccctgcatgagatagc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tatttatcaagtccgcactatgcagaatcctcacatgatctctgccctgcatgagataga 388
Query: 301 gtttcctcgtaatgttgaaatgtaaaaatcaatttgcaaatttccaaattatatattaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtttcctcgtaatgttgaaatgtaaaaatcaatttgcaaatttccaaattatatattaga 328
Query: 361 taatgcgtagcctcgagcaggtgactctttagaaagtcagcagcgatgattttcacaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 taatgcgtagcctcgagcaggtgactctttagaaagtcagcagcgatgattttcacaagt 268
Query: 421 ttcacagaacttatcgaagaggcacatcttgagaaataaacataaggagactgaaatgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttcacagaacttatcgaagaggcacatcttgagaaataaacataaggagactgaaatgtg 208
Query: 481 tgactga 487
|||||||
Sbjct: 207 tgactga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
