Query= MSMg01no394_i02.b1 MSMg01no394_i02.b1 CHROMAT_FILE:
MSMg01no394_i02.b1 PHD_FILE: MSMg01no394_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:54 2005
(448 letters)
>mm_chr16_55249067_55249914
Length = 848
Score = 816 bits (422), Expect = 0.0
Identities = 437/442 (98%)
Strand = Plus / Minus
Query: 7 attcatggaatgctctgtgatatttggcatggttaaagagcaactgtgtccctccttagt 66
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 648 attcatggaatgctgtgtgatatttggcatggtgaaagagcaactgtgtccctccttagt 589
Query: 67 ttcatgaaaatcataaacattatttctatgatgattgtgcttcaattctagtaggattta 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ttcatgaaaatcataaacattatttctatgatgattgtgcttcaattctagtaggattta 529
Query: 127 tgaatacaaggaaagcttagagtataggaaaacataagtgtaacattcccaagaatttct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgaatacaaggaaagcttagagtataggaaaacataagtgtaacattcccaagaatttct 469
Query: 187 gggagttcatggtctccttgaaatttgtcgaagaatgggaactccttgatcctccaaaga 246
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 468 gtgagttcatggtctccttgaaatttgtctaagaatgggaactccttgatcctccaaaga 409
Query: 247 aaacactggaaagtctaattcttagtaaatttagcgcttgtatttatttgttcaaaatta 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aaacactggaaagtctaattcttagtaaatttagcgcttgtatttatttgttcaaaatta 349
Query: 307 tgtgtaagacccctgacacggtgctgtattgaagacacagatgtaagacctaggtgggtc 366
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgtgtaagacacctgacacggtgctgtattgaagacacagatgtaagacctaggtgggtc 289
Query: 367 cggtccacctggcattctaaagatggcaactaggataaccatgtgctacagagaattaac 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cggtccacctggcattctaaagatggcaactaggataaccatgtgctacagagaattaac 229
Query: 427 acatgtgagtaagttggaggct 448
||||||||||||||||||||||
Sbjct: 228 acatgtgagtaagttggaggct 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_i02.g1 MSMg01no394_i02.g1 CHROMAT_FILE:
MSMg01no394_i02.g1 PHD_FILE: MSMg01no394_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:54 2005
(505 letters)
>mm_chr16_55075229_55076128
Length = 900
Score = 891 bits (461), Expect = 0.0
Identities = 493/506 (97%), Gaps = 7/506 (1%)
Strand = Plus / Plus
Query: 1 cttgcttttgggaagctgtctgttctaaaatttgatt-ttttttttctctcaggaaggac 59
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 cttgcttttgggaagctgtctattctaaaatttgattattttttttctctcaggaaggac 260
Query: 60 taactaactgaaaagtacctttgactttgtatgacttcttttcattcattaacaatgtct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taactaactgaaaagtacctttgactttgtatgacttcttttcattcattaacaatgtct 320
Query: 120 gaaattaaaccaaggagatgagattctaaattctatgatagtgtaagcacagtctcagta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaattaaaccaaggagatgagattctaaattctatgatagtgtaagcacagtctcagta 380
Query: 180 tgataatacattgataagataaaaattattgatgagattgagactgttgatagtatgatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgataatacattgataagataaaaattattgatgagattgagactgttgatagtatgatt 440
Query: 240 cagagccattgtctattgtggtactgtagatgggtttaagtgatagcctcttttgatagg 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagaaccattgtctattgtggtactgtagatgggtttaagtgatagcctcttttgatagg 500
Query: 300 ttttgttgtgtcacatgagcaagtcattactctatgtactgttggaatgaactatcacta 359
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 501 ttttgttgtgtcacatgagcaagtcatta-tcta----ctgttggaatgaactatcacta 555
Query: 360 ctctatcatgaggtactattttgattccatggtttcctcagtatattagcctggcttgta 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 556 ctctatcatgaggtactattttgattccatggtttcctcagtatattagcctggtttgta 615
Query: 420 atgaataatgaacattccttgatatttaatatataagacatttatttatactcaataaat 479
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 atgaataatgaatgttccttgatatttaatatataagacatttatttatactcaataaat 675
Query: 480 atttctcanaaggattaaaaaaaaag 505
|||||||| |||||| ||||||||||
Sbjct: 676 atttctcaaaaggat-aaaaaaaaag 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 900
Length adjustment: 10
Effective length of query: 495
Effective length of database: 890
Effective search space: 440550
Effective search space used: 440550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
