Query= MSMg01no395_n02.b1 MSMg01no395_n02.b1 CHROMAT_FILE:
MSMg01no395_n02.b1 PHD_FILE: MSMg01no395_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:46 2005
(374 letters)
>mm_chr16_32646233_32647006
Length = 774
Score = 665 bits (344), Expect = 0.0
Identities = 362/370 (97%), Gaps = 5/370 (1%)
Strand = Plus / Plus
Query: 5 gaattctgctctttta---catacataaagcatacaccttcacacttcctttaggttgcc 61
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgctctc--agcgcatacataaagcatacaccttcacacttcctttaggttgcc 261
Query: 62 ttgcctgcactttaggatgaacaggagagcaactggtctgctctttgggactccctgagc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttgcctgcactttaggatgaacaggagagcaactggtctgctctttgggactccctgagc 321
Query: 122 ttgctgtgcctaggagtttgtgtaaatggaagtcagttagtgaccttttagagtctggct 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttgctgtgcctaggagtttgtgtaaatggaagtcagttagtgaccttttagagtctggct 381
Query: 182 tctctggagcagcatccctgtttcacatctcccccgtgtagtatcgcgttgcatgtatca 241
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 382 tctctggagcagcatccctgtttcacatctcccccgtgtagtatcgtgttgcatgtatca 441
Query: 242 cattggttcattcccagtcattgtcagcggtctcttatgtgtgtgtcactcggatttggt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cattggttcattcccagtcattgtcagcggtctcttatgtgtgtgtcactcggatttggt 501
Query: 302 attacaagtacagcttctttgagtgattgtgtttgtttttttgtggatattggcttttat 361
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 attacaagcacagcttctttgagtgattgtgtttgtttttttgtggatattggcttttat 561
Query: 362 ttctcccagg 371
||||||||||
Sbjct: 562 ttctcccagg 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_n02.g1 MSMg01no395_n02.g1 CHROMAT_FILE:
MSMg01no395_n02.g1 PHD_FILE: MSMg01no395_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:47 2005
(408 letters)
>mm_chr16_32839555_32840362
Length = 808
Score = 717 bits (371), Expect = 0.0
Identities = 398/407 (97%), Gaps = 4/407 (0%)
Strand = Plus / Minus
Query: 1 actatgtgacccgacctggcccaaaacacattgtgctaggacggcagccatgtgtc-agc 59
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 531 actatgtgacccgacctggcccagaacacattgtgctaggacggcagccatgtgtcaagc 472
Query: 60 ttgctcagcacctgccttctcttgaagcttctcctcctctctgctgcctaaatcctctgc 119
||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||
Sbjct: 471 ttgctcagcacctgccttctcttgaagctcctccttctctctgctg-ctaaatcctctgc 413
Query: 120 ttcggaagccatcctccttggcctccccagaattgacgtgatgttacttttactctcctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ttcggaagccatcctccttggcctccccagaattgacgtgatgttacttttactctcctg 353
Query: 180 agtttcgtttttattagggaaggtaatttttctgatactgttttaaaacatagtgtcaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agtttcgtttttattagggaaggtaatttttctgatactgttttaaaacatagtgtcaag 293
Query: 240 gtattgggaaattttcagtacacctatttttgattttaccgtcccgtctgaaaactgtct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtattgggaaattttcagtacacctatttttgattttaccgtcccgtctgaaaactgtct 233
Query: 300 tttaaactagtttgtcaagaagttagtgattggccgggcagtggtgg-tgcacgccttta 358
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 232 tttaaactagtttgtcaagaagttagtgattggccgggcagtggtggct-cacgccttta 174
Query: 359 accccagcacttgggaggcagaggcaggcggatttctgagtttgagg 405
|||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 173 accccagcacttggaaggcagaggcaggcggatttctgagttcgagg 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
