Query= MSMg01no396_g05.b1 MSMg01no396_g05.b1 CHROMAT_FILE:
MSMg01no396_g05.b1 PHD_FILE: MSMg01no396_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:30 2005
(273 letters)
>mm_chr16_85048740_85049412
Length = 673
Score = 487 bits (252), Expect = e-142
Identities = 264/268 (98%)
Strand = Plus / Plus
Query: 6 ggaattctccctattctcctaataaaaacacaaaatgatagacacgctactctgatacat 65
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattctccgtattctcctaataaaaacacaaaatgatagacacgctactctgatacat 265
Query: 66 gcctggaagtcacagacggatcttcagaagggcgggattgctgaaaaccaacggaaacag 125
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 266 gcctggaagtcacagacggatcttcagaagggcgggattgctgaaaaccaacagaaacag 325
Query: 126 atattttggttgcaatccaccccacttttaaagttctggacacttatattaagggaacta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atattttggttgcaatccaccccacttttaaagttctggacacttatattaagggaacta 385
Query: 186 aatatttccacgaagaaccatagctttgttacctgagacaacaacactctgctggagtta 245
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aatatttccacgaagaaccagagctttgttacctgagacaacaacactctgctggagtta 445
Query: 246 acgattaattgaaaaggcgaaaatgtat 273
| ||||||||||||||||||||||||||
Sbjct: 446 atgattaattgaaaaggcgaaaatgtat 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_g05.g1 MSMg01no396_g05.g1 CHROMAT_FILE:
MSMg01no396_g05.g1 PHD_FILE: MSMg01no396_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:30 2005
(437 letters)
>mm_chr16_85202138_85202971
Length = 834
Score = 687 bits (355), Expect = 0.0
Identities = 416/437 (95%), Gaps = 3/437 (0%)
Strand = Plus / Minus
Query: 1 attttgtttactttttatccacagccaagctattgctttgcttaagttgccattgaccaa 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 634 attttgtttactttttatccacagccaagctattgctttatttaagttgccattgaccaa 575
Query: 61 ctttaatttcctttcactttttaaaatactgcatagcattgttttcctttattgtaggat 120
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 574 ctttaatttcctttcattttttaaaatactgcatagcattgttttcttttattgtaggat 515
Query: 121 ctcataaagataccagcctataactaacatatggccttaaatttgtgtaaaccttctaca 180
||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||
Sbjct: 514 ctcataaagataccagcctataactaatatatggtcttaaatttgtgaaaaccttctac- 456
Query: 181 aaaatggtgctaaaaaatagccatagaggtgcctgtcttctctatgttattgtgattcat 240
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 455 aaaatggtgctaaaagatagccatagaggtgcctgttttctctatgttattgtgattcat 396
Query: 241 gattccttatcttttcatttgcctagaactttttgggtgttggtgtgagtgacaaacacc 300
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gattcc--aacttttcatttgcctagaactttttgggtgttggtgtgagtgacaaacacc 338
Query: 301 tgctaatgctaaattcctaataactctgtgtttgtcttcttatataaacatttgaggaac 360
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 337 tgctaatactaaattcctagtaactctgtgtttgtcttcttatataaacatttgaggacc 278
Query: 361 aacctcaacaaggagaatcatgtttaaaatttttactctttgtgaaataccaatggatca 420
||||||| |||||||||| ||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 277 aacctcagcaaggagaataatgtttaaaatgtttactctttgtgaagtaccaatggatca 218
Query: 421 gaaaacattgcaatgta 437
|||||||||| ||||||
Sbjct: 217 gaaaacattgaaatgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 834
Length adjustment: 9
Effective length of query: 428
Effective length of database: 825
Effective search space: 353100
Effective search space used: 353100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
