Query= MSMg01no397_o10.b1 MSMg01no397_o10.b1 CHROMAT_FILE:
MSMg01no397_o10.b1 PHD_FILE: MSMg01no397_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:29 2005
(437 letters)
>mm_chr16_76782507_76783343
Length = 837
Score = 663 bits (343), Expect = 0.0
Identities = 363/371 (97%), Gaps = 4/371 (1%)
Strand = Plus / Minus
Query: 5 gaattccttccatgtctctaaaatgtgcttcaaactcatttgcaggacaaaaataatagc 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaattccttccaagtctctaaaatgtgcttcaaactcatttgcaggacaaaaataatagc 482
Query: 65 tgctgaatcacagagttctggtcagacaactctgcctcgtgtctgctgtgcagtaattca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgctgaatcacagagttctggtcagacaactctgcctcgtgtctgctgtgcagtaattca 422
Query: 125 tagttctgtttacagagcccatagttctaatacaaatgagtgttactccaactcattaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tagttctgtttacagagcccatagttctaatacaaatgagtgttactccaactcattaga 362
Query: 185 aagggagagagatggattctatttgcaaatgttaattagaaaaatctggagttctaggtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagggagagagatggattctatttgcaaatgttaattagaaaaatctggagttctaggtc 302
Query: 245 agtccttgaacctccttgtagcactgacaggattgtctttgaaaaaattatttatatgga 304
||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 301 agtccttgaacctccttgtaggactgacaggagggtctttgaaaaaattatttatatgga 242
Query: 305 caagaagaggtcatagaaatgaagaagtctgatcaactcttttctctctctctctctctc 364
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 241 caagaagaggtcatagaaatgaagaagtctgatcaac-c---tctctctctctctctctc 186
Query: 365 tctctctctct 375
|||||||||||
Sbjct: 185 tctctctctct 175
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_o10.g1 MSMg01no397_o10.g1 CHROMAT_FILE:
MSMg01no397_o10.g1 PHD_FILE: MSMg01no397_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:29 2005
(416 letters)
>mm_chr16_76744463_76745278
Length = 816
Score = 789 bits (408), Expect = 0.0
Identities = 414/416 (99%)
Strand = Plus / Plus
Query: 1 catcagacaggttttttgtatattaatgatacatataagcaaataaataatgtaatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcagacaggttttttgtatattaatgatacatataagcaaataaataatgtaatttta 260
Query: 61 aagtccagaaataaattaactcttatgttagaaatatataagaagaaatatgaagaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtccagaaataaattaactcttatgttagaaatatataagaagaaatatgaagaaaaa 320
Query: 121 tgcaacaaatataaaaatgcaaatatggatttttttaaaaagtcttacagaatttttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcaacaaatataaaaatgcaaatatggatttttttaaaaagtcttacagaatttttatg 380
Query: 181 gaaacataaatatgtgtgttagcattgatgtaaaaacactaaaattagtcttgtcttgaa 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaacataaatatgtgtgttagcactgatgtaaaaacactaaaattagtcttgtcttgaa 440
Query: 241 ggaagtaagtagacaacttatgaaactgacaaaagtctagaaatagcagtgttagtttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaagtaagtagacaacttatgaaactgacaaaagtctagaaatagcagtgttagtttgt 500
Query: 301 gttatttagaaatacagaggtaaatgaaaagctgtaagaattaatttctctgaagcaggg 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 gttatttagaaatacagaggtaaatgaaaagctgtaagaagtaatttctctgaagcaggg 560
Query: 361 ggacagcagtgggagttaaagttgtagcatgtccttttaaaccaggcacataactc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggacagcagtgggagttaaagttgtagcatgtccttttaaaccaggcacataactc 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
