Query= MSMg01no398_n07.b1 MSMg01no398_n07.b1 CHROMAT_FILE:
MSMg01no398_n07.b1 PHD_FILE: MSMg01no398_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:41 2005
(286 letters)
>mm_chr16_23866837_23867522
Length = 686
Score = 507 bits (262), Expect = e-148
Identities = 277/282 (98%)
Strand = Plus / Minus
Query: 1 aaataccacccctggaagcttccctgaaattaataatagggtatggcatctatgttgaga 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 482 aaataccacccctggaagcttccctgaaattaataaaagggtatggcatctatgttggga 423
Query: 61 aactcctctctattacaactttatacaccgacgaccttaactcaccaattcaagacagat 120
||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 422 aactcctctctattacaactttatacattgatgaccttaactcaccaattcaagacagat 363
Query: 121 actaactaaatggattacaaaacaagagtaggaaaacttgttattaccaagaaatttaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actaactaaatggattacaaaacaagagtaggaaaacttgttattaccaagaaatttaca 303
Query: 181 taactaggaaaaacaacagcaataataaaacccctgagagtcaaaaggtagaaatcactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 taactaggaaaaacaacagcaataataaaacccctgagagtcaaaaggtagaaatcactc 243
Query: 241 tacagagcaaaggcaaactctatctggctattgcggtgattg 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tacagagcaaaggcaaactctatctggctattgcggtgattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no398_n07.g1 MSMg01no398_n07.g1 CHROMAT_FILE:
MSMg01no398_n07.g1 PHD_FILE: MSMg01no398_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:41 2005
(239 letters)
>mm_chr16_23673055_23673695
Length = 641
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%), Gaps = 2/238 (0%)
Strand = Plus / Plus
Query: 4 tggcccagacaccaatcctgccaccatcaggggtcatttagagcttctatggccaggaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tggcccagacaccaatcctgccaccatcaggggtcatttagagcttctatggccaggaat 263
Query: 64 agcacatatttgatatcatcacagcctggttgctggtcctgtttagagattcataatctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agcacatatttgatatcatcacagcctggttgctggtcctgtttagagattcataatctc 323
Query: 124 taaacgtgaaggtgttgcctag-tac-attatttctgacttttaaaatatatttatttga 181
|||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |
Sbjct: 324 taaacgtgaaggtgttgcctaggtattattatttctaacttttaaaatatatttatttaa 383
Query: 182 ggtgtattggcattttgtctgtctgtctgtttatctgtatgtgtatcatatgtgtgcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggtgtattggcattttgtctgtctgtctgtttatctgtatgtgtatcatatgtgtgcc 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 641
Length adjustment: 9
Effective length of query: 230
Effective length of database: 632
Effective search space: 145360
Effective search space used: 145360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
