Query= MSMg01no399_n04.b1 MSMg01no399_n04.b1 CHROMAT_FILE:
MSMg01no399_n04.b1 PHD_FILE: MSMg01no399_n04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:56 2005
(365 letters)
>mm_chr16_87727717_87728482
Length = 766
Score = 605 bits (313), Expect = e-177
Identities = 347/359 (96%), Gaps = 5/359 (1%)
Strand = Plus / Plus
Query: 10 gaattcctattc-ttcgcatatttaaaa--atcatataaccttaatattttacaaacacc 66
|||||||||||| || |||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 210 gaattcctattcatt-gcatatttaaaaatatcatataatcttaatattttacaaacacc 268
Query: 67 actaataattgaattttcacataacactgtagaaatatttttgtgagctctgctaggtac 126
|||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 269 actaataattaaattttcacataacaccgtagaaatatttttgtgagctctgctaggtac 328
Query: 127 acacgtgtaagagcacatctgtatctagcagagctcttgctacctttaaactatttttat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acacgtgtaagagcacatctgtatctagcagagctcttgctacctttaaactatttttat 388
Query: 187 gctagaaggaccaaaagtttgacagttagaaattaccgctgtgaaatacagcatctgggt 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 389 gctagaaggaccaaaagtttgacagttagaaattaccgctgtgaaatacagcatc-gggt 447
Query: 247 ggtctctcggagccctggctcttcagagctgtcagcgagcagcgagcatgcggtggtggt 306
||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 448 ggtctctaggagccctggctcttcagagctgtcagcgagcagagagcaggcggtggtggc 507
Query: 307 ctctggttcccttagacactagtcgtgctgtttccacgggggaaacctttgtcctgcgg 365
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ctctggttcccttagacactagtcgtgctgtttccacgggggaaacctttgtcctgcgg 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 766
Length adjustment: 9
Effective length of query: 356
Effective length of database: 757
Effective search space: 269492
Effective search space used: 269492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_n04.g1 MSMg01no399_n04.g1 CHROMAT_FILE:
MSMg01no399_n04.g1 PHD_FILE: MSMg01no399_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:56 2005
(338 letters)
>mm_chr16_87898301_87899038
Length = 738
Score = 561 bits (290), Expect = e-164
Identities = 326/338 (96%)
Strand = Plus / Minus
Query: 1 aaaataatatgaatagttaaatttaaatccatattagttaaaacaaaagcaagaaaataa 60
|||||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||
Sbjct: 538 aaaataatatgagtagttaaatttcaatccataggagttaaaacaaaagcaagacaataa 479
Query: 61 tttttgtaagatgttttatggagaaaaagtttaccaaattcttatagtgactttttaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tttttgtaagatgttttatggagaaaaagtttaccaaattcttatagtgactttttaaaa 419
Query: 121 gtctaaatatttatgattttcactgaaagaagttgaggctatcagtccatataaatggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gtctaaatatttatgattttcactgaaagaagttgaggctatcagtccatataaatggag 359
Query: 181 ttatatggtatttccttttttgttttcttttagtattcccaataataatttctgcccatc 240
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 358 ttatgtggtatttccttttttgttttctcttagtattcccaataataatttctgcccatc 299
Query: 241 tacctaatgggtggaacaaggtttggatgaaataatatttataaaatcttgacgctctta 300
| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tccctagtggatggaacaaggtttggatgaaataatatttataaaatcttgacgctctta 239
Query: 301 ctttcctttatcttgtatctccattaaaatgatcattc 338
|||||||||||||||| |||||||| ||||||||||||
Sbjct: 238 ctttcctttatcttgtctctccatttaaatgatcattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
