Query= MSMg01no405_d24.b1 MSMg01no405_d24.b1 CHROMAT_FILE:
MSMg01no405_d24.b1 PHD_FILE: MSMg01no405_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:11 2005
(422 letters)
>mm_chr16_18865351_18866172
Length = 822
Score = 772 bits (399), Expect = 0.0
Identities = 414/419 (98%)
Strand = Plus / Plus
Query: 4 ggaattcactttgtattccaggctggcctcaaactcaaaaatccgcctgcctctgcctct 63
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattttgtagaccaggctggcctcaaactcaaaaatccgcctgcctctgcctct 263
Query: 64 cgagtgctggaattaaaggtgtgtgccatcaccacccagccagtttggtattcttaacta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cgagtgctggaattaaaggtgtgtgccatcaccacccagccagtttggtattcttaacta 323
Query: 124 atatacattgttaagtgaagcttgagtggaaactaaacactttaaaataagccttgatta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atatacattgttaagtgaagcttgagtggaaactaaacactttaaaataagccttgatta 383
Query: 184 gacatacctaactgtactattgcttgaccctctggaagcactcatggtgattttctatta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacatacctaactgtactattgcttgaccctctggaagcactcatggtgattttctatta 443
Query: 244 agaagaaagtactatctaaattaggagatcctattcactattcatcatatgtaaattagg 303
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 agaagaaagtactatctaaattaggagatcctattcacaattcatcatatgtaaattagg 503
Query: 304 tttaagtccctataatctagagggtagtcaattaaaaacaagcagaacaaaaacatttaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tttaagtccctataatctagagggtagtcaattaaaaacaagcagaacaaaaacatttaa 563
Query: 364 aaacatttagaaggtgattgtataaactgaggaaaactatactccatgggatagcttat 422
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 564 aaacatttagaaggtgattgtataaactgaggaaaactatactccatggtatagcttat 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_d24.g1 MSMg01no405_d24.g1 CHROMAT_FILE:
MSMg01no405_d24.g1 PHD_FILE: MSMg01no405_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:11 2005
(414 letters)
>mm_chr16_19028342_19029154
Length = 813
Score = 663 bits (343), Expect = 0.0
Identities = 358/363 (98%), Gaps = 4/363 (1%)
Strand = Plus / Minus
Query: 53 aggaaagggactggtgagatggctcaatgggtaagagcacccgaccgc-tcttctgaagg 111
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 813 aggaaagggactggtgagatggctcaatgggtaagagcacccgaccgcttcttctgaagg 754
Query: 112 tcctgagttcaaatcccagcaaccatatggtagctcacaaccatctatagggagatctga 171
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 753 tcctgagttcaaatcccagcaaccatatggtagctcacaaccatctataggg-gatctga 695
Query: 172 ctacctcttctggagtgtctgaagaaagctacagtgtacttatatataataaataaataa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ctacctcttctggagtgtctgaagaaagctacagtgtacttatatataataaataaataa 635
Query: 232 ataaatctaaaaaaaaagaagagaaagaaaaattgtgctgcacgtctcttgttacctgaa 291
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ataaatct-aaaaaaaagaagagaaagaaaaattgtgctgcacgtctcttgttacctgaa 576
Query: 292 aacataataggtgtacatatattaaatatattcttgcaactgtccaggtcatgtttacca 351
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aacataataggtgtgcatatattaaatatattcttgcaactgtccaggtcatgtttacca 516
Query: 352 gctgcaattcttttacttattgtgtgactattgtgcatggtgatatttaatcaagacatt 411
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gctgcaat-cttttacttattgtgtgactattgtgcatggtgatatttaatcaagacatt 457
Query: 412 aac 414
|||
Sbjct: 456 aac 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 6
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 813
Length adjustment: 9
Effective length of query: 405
Effective length of database: 804
Effective search space: 325620
Effective search space used: 325620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
