Query= MSMg01no405_k18.b1 MSMg01no405_k18.b1 CHROMAT_FILE:
MSMg01no405_k18.b1 PHD_FILE: MSMg01no405_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:43 2005
(451 letters)
>mm_chr16_77569759_77570609
Length = 851
Score = 841 bits (435), Expect = 0.0
Identities = 447/451 (99%)
Strand = Plus / Minus
Query: 1 gctatctgtatatggtcaggatattttttttaatttataaattttttaataatacattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gctatctgtatatggtcaggatattttttttaatttataaattttttaataatacattta 646
Query: 61 actgtgagataaggaatacgttagcaccttagcagtaactattttgttcatagaactaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 actgtgagataaggaatacgttagcaccttagcagtaactattttgttcatagaactaaa 586
Query: 121 tcaacaatcatgataccaaacatatggagttagttataagattaaaatatagatatagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tcaacaatcatgataccaaacatatggagttagttataagattaaaatatagatatagag 526
Query: 181 tgttcatgtaaattaaatgcctcaggcatccgctctgtacggtactctctaattgccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgttcatgtaaattaaatgcctcaggcatccgctctgtacggtactctctaattgccatc 466
Query: 241 ccctgacagctattattttatcgtctgcttcacacctgcatttctggaagtgaatcctat 300
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccctgacagctaaaagcttatcgtctgcttcacacctgcatttctggaagtgaatcctat 406
Query: 301 ggttcttttcctggctccagggtgcctccagacttcacttccatctccagcacccagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ggttcttttcctggctccagggtgcctccagacttcacttccatctccagcacccagcaa 346
Query: 361 tgccttgcatactaattccacacaaattcattttaagtgctgattttattatgtaacaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgccttgcatactaattccacacaaattcattttaagtgctgattttattatgtaacaac 286
Query: 421 cttgctcgaatgtcgcctttgggtcccgatt 451
|||||||||||||||||||||||||||||||
Sbjct: 285 cttgctcgaatgtcgcctttgggtcccgatt 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_k18.g1 MSMg01no405_k18.g1 CHROMAT_FILE:
MSMg01no405_k18.g1 PHD_FILE: MSMg01no405_k18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:43 2005
(452 letters)
>mm_chr16_77425528_77426380
Length = 853
Score = 824 bits (426), Expect = 0.0
Identities = 446/456 (97%), Gaps = 7/456 (1%)
Strand = Plus / Plus
Query: 1 atctttgtcatttgactgacttttacatactaaatgcctgggaataggctagatgcccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctttgtcatttgactgacttttacatactaaatgcctgggaataggctagatgcccaa 260
Query: 61 tgtctaagggtggacatctggaaagattagatatctggagaactaataaagaactgagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtctaagggtggacatctggaaagattagatatctggagaactaataaagaactgagac 320
Query: 121 tcctgactggatgcagttcttaagttggagagcactgagtttcatgatgataggtcttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgactggatgcagttcttaagttggagagcactgagtttcatgatgataggtcttga 380
Query: 181 aaggtatctgggcagctactgtgaatatccatggggtatctatagggtggttataattta 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggtatctgggcaactactgtgaatatccatggggtatctatagggtggttataattta 440
Query: 241 ccttccc----ttttatgcactctaaacactaagcacttctgctcatatgctgtgaagat 296
||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttcccaaaat---atgcactctaaacactaagcacttctgctcatatgctgtgaagat 497
Query: 297 gtagttacataacattggatggtcattgggaattaaagatgattttacccatgatttcga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gtagttacataacattggatggtcattgggaattaaagatgattttacccatgatttcga 557
Query: 357 ctcttatataactcattgtatggtgcatagacagcttgtgtgtccttctagcactagaga 416
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 558 ctcttatataactcatggtatggtgcatagacagcttgtgtgtccttctaccactagaga 617
Query: 417 aaatcaactggatagacttttcttccttgaaatcaa 452
||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaatcaactggatagacttttcttccttgaaatcaa 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 853
Length adjustment: 10
Effective length of query: 442
Effective length of database: 843
Effective search space: 372606
Effective search space used: 372606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
