Query= MSMg01no408_c21.b1 MSMg01no408_c21.b1 CHROMAT_FILE:
MSMg01no408_c21.b1 PHD_FILE: MSMg01no408_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:04 2005
(493 letters)
>mm_chr16_37464636_37465532
Length = 897
Score = 830 bits (429), Expect = 0.0
Identities = 470/493 (95%), Gaps = 16/493 (3%)
Strand = Plus / Plus
Query: 5 gaattcccaatcttctcgcatgtaatttgtaaatacttaaggtgagttactatcatgtct 64
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattcccaatcttcttgcatgtaatttgtaaatacttaaggtgagttaccatcatgtct 264
Query: 65 ctgctgtgtctcctgattgtaggaagctgttctgatagacctacactgt----gcttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 ctgctgtgtctcctgattgtaggaagctgttctgatagacctacactgtttgtgcttttg 324
Query: 121 tatgtacactctaaaatatccacacaatgatgaaaatggttaatgctgcatttcccagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgtacactctaaaatatccacacaatgatgaaaatggttaatgctgcatttcccagac 384
Query: 181 tatatctgcatcattaaataacacgtgactataagtgctttcgtgtttgccattggcata 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 385 tatatctgcatcattaaataacacatgactataagtgctttcgtgtttgccattggcata 444
Query: 241 tgtcaaagattggcaagcccagtctaaaagtaacgaggtatctggcacaaaggaaactcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtcaaagattggcaagcccagtctaaaagtaacgaggtatctggcacaaaggaaactcc 504
Query: 301 aattccacaaactccaaaaggcattccaaatagccagaaatgagctcaagctagactata 360
|||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 505 aattccacaaactccaaaaggc------------cagaaattagctcaagctagactata 552
Query: 361 ggatttttggcagttagataaaagctagaattccccagaaacttttgaaactggttccca 420
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 553 ggacttttggcagttagataaaagctagaattcaccagaaacttttgaaactggttccca 612
Query: 421 tctgctgaaaggaaccatttcactcacctctggcagaagggatatagggcccacctgtcg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 613 tctgctgaaaggaaccatttcactcacctctggcagaagggatatagggcccacctgttg 672
Query: 481 tgcctatcagcat 493
|||||||||||||
Sbjct: 673 tgcctatcagcat 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 897
Length adjustment: 10
Effective length of query: 483
Effective length of database: 887
Effective search space: 428421
Effective search space used: 428421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_c21.g1 MSMg01no408_c21.g1 CHROMAT_FILE:
MSMg01no408_c21.g1 PHD_FILE: MSMg01no408_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:04 2005
(424 letters)
>mm_chr16_37628664_37629487
Length = 824
Score = 801 bits (414), Expect = 0.0
Identities = 421/424 (99%), Gaps = 2/424 (0%)
Strand = Plus / Minus
Query: 1 tctgagatagaacacacacacacacacacacacacacacacacacacacacacacacaca 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tctgagataga--acacacacacacacacacacacacacacacacacacacacacacaca 420
Query: 61 ctgcgttgcatttagatacagcaagacccttttaagtgaatcgacaatgtttccttgcat 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ctgctttgcatttagatacagcaagacccttttaagtgaatcgacaatgtttccttgcat 360
Query: 121 ttgaagttagtgaacactccataaggagttaaaactctggctggatagcgtacccattct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ttgaagttagtgaacactccataaggagttaaaactctggctggatagcgtacccattct 300
Query: 181 acagatgggaaaaatgaaacatggagatactgcataggagctgagttaggatttgaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acagatgggaaaaatgaaacatggagatactgcataggagctgagttaggatttgaactg 240
Query: 241 gtctcactctcagttcaatctctttctacactgtcacaccagaagtgtagcatgtgcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtctcactctcagttcaatctctttctacactgtcacaccagaagtgtagcatgtgcaca 180
Query: 301 atgctgtatgtattcatacttaacaacatgcgcatgcaggcacaaatttctcctcactcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atgctgtatgtattcatacttaacaacatgcgcatgcaggcacaaatttctcctcactcc 120
Query: 361 acctctgtgactttggagagtaaaaactaaccgcttttctctatggacgtttggggagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 acctctgtgactttggagagtaaaaactaaccgcttttctctatggacgtttggggagcc 60
Query: 421 caga 424
||||
Sbjct: 59 caga 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
