Query= MSMg01no408_h11.b1 MSMg01no408_h11.b1 CHROMAT_FILE:
MSMg01no408_h11.b1 PHD_FILE: MSMg01no408_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:27 2005
(513 letters)
>mm_chr16_80537353_80538264
Length = 912
Score = 526 bits (272), Expect = e-153
Identities = 303/320 (94%), Gaps = 13/320 (4%)
Strand = Plus / Plus
Query: 5 gaattcatcgttgagcgaatcttatgttgtatg----------ttatttatagaatggga 54
||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 195 gaattcatcgttgagagaatcttatgttgtatggtatgtttccttatttatagaatggga 254
Query: 55 atttttggtatatttataaatatgtaaatttttctctaaacctcatggctataaataata 114
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 atttttggtgtatttataaatatgtaaatttttctctaaacctcatggctataaataata 314
Query: 115 attatcaaacaatgtgtattatgtctc-aaaaaagataaaaagagataatgactccctcc 173
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 315 actatcaaacaatgtgtattatgtctcaaaaaaagataaaaagagataatgactccctcc 374
Query: 174 cccctgtgtgtgtgtgtgtctgtgtgcaaagtaaaatatatattgctcaatattaagttt 233
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccgc--tgtgtgtgtgtgtctgtgtgcaaagtaaaatatatattgctcaatattaagttt 432
Query: 234 gcaatatcggtgttcttcagtggcacagcatgctatttttatgtgaggtttttgtcttat 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcaatatcggtgttcttcagtggcacagcatgctatttttatgtgaggtttttgtcttat 492
Query: 294 ttttctatgtcattctagtt 313
||||||||||||||||||||
Sbjct: 493 ttttctatgtcattctagtt 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space: 453706
Effective search space used: 453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_h11.g1 MSMg01no408_h11.g1 CHROMAT_FILE:
MSMg01no408_h11.g1 PHD_FILE: MSMg01no408_h11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:27 2005
(514 letters)
>mm_chr16_80686540_80687453
Length = 914
Score = 685 bits (354), Expect = 0.0
Identities = 387/398 (97%), Gaps = 1/398 (0%)
Strand = Plus / Minus
Query: 117 tctttctggaaaatttgagtatggctgaatcaaaaagtaaaagaataatgcatttcattg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tctttctggaaaatttgagtatggctgaatcaaaaagtaaaagaataatgcatttcattg 855
Query: 177 agaaaatttcaatgtcatgtagcacttaggctgggatatggttcttctcagctgttctca 236
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 854 agaaaatttcaatatcatgtagcactt-tgctgggatatggttcttctcagctgttctca 796
Query: 237 cccaaatgttctgtcaaaatcacagtgagcaacaggaggaacatgagtcttagaacaatg 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 795 cccaaatgttctgtcaaaatcacagtgagcaacaggaggaacatgagtcttagaccaatg 736
Query: 297 tgcatcttggtgagaaaggaaggttggactattttaacttgtccacaacgcatgggagaa 356
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 735 tgcatcttggtgagaaaggaaggttggacaattttaacttgtccacaacgcatgggagaa 676
Query: 357 agcagaggcccaaatgaggaactagtctaactcatttctgaattttctagcaacatcagt 416
|||| |||||||||| | |||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 675 agcaaaggcccaaattaagaactagtctaactcatttctgaagtttctagcaacaccagt 616
Query: 417 tatgcacaatatttctttgagttttaaaaatagttaataaatagattgtaaaatgggctt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tatgcacaatatttctttgagttttaaaaatagttaataaatagattgtaaaatgggctt 556
Query: 477 tatatcacatccactttcttgtaaacttttaaatataa 514
||||||||||| ||||||||||||||||||||||||||
Sbjct: 555 tatatcacatctactttcttgtaaacttttaaatataa 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
